Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi341g00016 ATGAAGCAATTGATTCGCAAGCTGTCTCGAGTCGCCGACTCGTCGCAGCAGTACACGCTCCTCCGATCCGAGTCACGGCGACCGCGTCGCGCCGAGTCTTTTCGGCGGAAGCGTGGCGCGGCGGTGCCGGAGGGTCACGTTCCGGTCTACGTTGGGGAGGAGATGGAGCGGTTCGTTGTGAGCGCGGAGCTTCTGAACCACCCGGTTTTCGTGAAGCTCCTGAACCGGTCGGCTCAGGAGTACGGTTACGAGCAGAAAGGTGTGCTTCGAATCCCATGCCACGTCATCATCTTCGAACAAGTCCTCGAAGCGCTTCAACTCGGCCACGACTCGGGTGACATCCACGACCTCCTTAGTTCCTCTGAAGAATTTTGCTAG 378 0.5899 MKQLIRKLSRVADSSQQYTLLRSESRRPRRAESFRRKRGAAVPEGHVPVYVGEEMERFVVSAELLNHPVFVKLLNRSAQEYGYEQKGVLRIPCHVIIFEQVLEALQLGHDSGDIHDLLSSSEEFC 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi341g00016 125 Pfam Auxin responsive protein 7 105 IPR003676 GO:0009733
Sebi341g00016 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi341g00016 Sebi-Chr341 408769 409146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi341g00016 40 106 Calmodulin-binding Proteins AT2G24400 43.284 4.29e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi341g00016 K14488 - cave:132175866 176.407