Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi33g00047 ATGGAAAACAAGAACCATAGTCTAGACCCAGACCTAGAGAAGCAACACCAGGCCTGGGGCACATGGGAAGAGCTCTTGCTAGCGTGCGCCGTCAACCGCCATGGCTTCAAAGACTGGGACACCGTCGCTATGGAAGTCCAGTCCCGCACCAACCGCCCCAACCTCCTCGCCACCGCACACAACTGCGAGCAAAAATTTCACGATCTTAACCGCCGATTCACCGACCAATGCAACGACGTCGTTTCGCCGCCCCGCCAAAACGGTGCCTCCGTGGGCGTTAACTCCGATCACGTCCCTTGGCTCGAAGAATTGCGTAAACTCCGCGTCGCCGAACTCCGGCGAGAGGTCCAACGCCATGACGTTAAGAGGTTGGAAGAGGAAAAAGCGAAAGAGAATGACGGAAAAGATGACGAACCCCCAGATCTGGGGGTTCGCTGCGAGCAGCGGCCGGAAAATGACAAAACCGGCGGAGAACTAGAAGAGGCTGGACCGGCCAATTCTGAACAGGAGATTCGCCGGCTCGATGAGAGCACCACTAACACTGATAAGCTTCCACCAACAACGGGTGACGAATCGGACCGGGAGAATCAGTCAGTAAATGAGTCTAACTCGACCGGTTCGAGGTTCGAGGTAGCGAAAACCGGGGAGGGTAACGCTAAGTTGGGGCTTGGACCGCCCCCGGTTCAAGCCGGTCCAAAAGAACCGGATTCGGTCGGAAGGAAGAAAAAATCGGTTGGAGAAGAATCGAATAACGGAAGTTACGATACCGAGGCTAAAGTCCCAACGTGCGAGTCGGTGCCTCCGAGTGAGGAGAGAAAGGTGGACGAGGACTCCTCCGAGTTGCACGACTCAGTGGCTCACTCGGGGGAGGGAGGGACGAGAGAGAGCAGCGAGGTGCAAAGCTCTGCGAGCTTGACGAGGAAGAGGCAGACGCGGCGAAGAAAGGAGGTTTCCAGCGCCGACGGTGGTGGTGAGTTGGCGCCGGAGAACGACGACGTTATGAAATCAGAACCGTTGGCTGGCATATTAGATATGATCAAAGGACATGAAAACATCTCCTTGTTGCGCCATCTCGAAATCCAGCAGTACTCGGATAGATACAAAGACGTGGTGAGACAGCATGTGGACTTGGAAACCATACAATTGAGACTCCAAAAGGGTTACTATTCCTCATGCACGAGCTCTTTCTTCCGCGACCTCCTCCTCCTCTTCACCAACGCCACCCCATGGCCAAACACAATCCGATCCTATCCCCAAAAGAACGATTCACTCCCTCCAAACGCACCACTGGCCAATCCAGATTCTTCTCTCCTCTCCAAGCACAAAGCCTCTGCTCCTATACTAGTTTGCCGCAAACGCAGTTCAATCTCAGCCAAACCTTCCTCAGCCACCTTTGGCCAAAAGGGTGACCAACAACCCGTTATCAATGACAAGAAGGAAAGGCTACCTTCTGATGCAAAACCACCCTTGAAACCTTCTTCTTCTGAGACAGACGAAGATGAACCTCCCAAGGCCAAGGAAAAGCCTGTCACTGGAGCGAGAAGCTTGAGGAGAAGCAATAAGAATCTCAACAGCAACCCTGGCAAGCAGAAGAAAATGGTGAGTAGTGGAAAGGGGGACAAAGGGAAAGAGAGGCCTTCAAGGCACAACGGTGGAGGAGGGTCAGGGGATAAAAGAAACAAGAATATTGAGAACAACTCTCAGTCCAAGAGGAGTGTTGGGAGACCTCCAAAGAAGGCAGCAGAGACCAATACAGTTAGTGCAAAGCGTGGTAGGGAAAGTAGTGCAAGCGCTGGCAAGGATAAACGACCTAAGAAGCGATCTAAGAAATGA 1833 0.5297 MENKNHSLDPDLEKQHQAWGTWEELLLACAVNRHGFKDWDTVAMEVQSRTNRPNLLATAHNCEQKFHDLNRRFTDQCNDVVSPPRQNGASVGVNSDHVPWLEELRKLRVAELRREVQRHDVKRLEEEKAKENDGKDDEPPDLGVRCEQRPENDKTGGELEEAGPANSEQEIRRLDESTTNTDKLPPTTGDESDRENQSVNESNSTGSRFEVAKTGEGNAKLGLGPPPVQAGPKEPDSVGRKKKSVGEESNNGSYDTEAKVPTCESVPPSEERKVDEDSSELHDSVAHSGEGGTRESSEVQSSASLTRKRQTRRRKEVSSADGGGELAPENDDVMKSEPLAGILDMIKGHENISLLRHLEIQQYSDRYKDVVRQHVDLETIQLRLQKGYYSSCTSSFFRDLLLLFTNATPWPNTIRSYPQKNDSLPPNAPLANPDSSLLSKHKASAPILVCRKRSSISAKPSSATFGQKGDQQPVINDKKERLPSDAKPPLKPSSSETDEDEPPKAKEKPVTGARSLRRSNKNLNSNPGKQKKMVSSGKGDKGKERPSRHNGGGGSGDKRNKNIENNSQSKRSVGRPPKKAAETNTVSAKRGRESSASAGKDKRPKKRSKK 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi33g00047 610 MobiDBLite consensus disorder prediction 290 306 - -
Sebi33g00047 610 SUPERFAMILY Bromodomain 340 408 IPR036427 GO:0005515
Sebi33g00047 610 Gene3D - 328 410 IPR036427 GO:0005515
Sebi33g00047 610 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 424 610 - -
Sebi33g00047 610 MobiDBLite consensus disorder prediction 417 437 - -
Sebi33g00047 610 CDD SANT 18 50 IPR001005 -
Sebi33g00047 610 Pfam Bromodomain 343 408 IPR001487 GO:0005515
Sebi33g00047 610 MobiDBLite consensus disorder prediction 559 573 - -
Sebi33g00047 610 MobiDBLite consensus disorder prediction 165 179 - -
Sebi33g00047 610 SUPERFAMILY Homeodomain-like 12 51 IPR009057 -
Sebi33g00047 610 Coils Coil 107 129 - -
Sebi33g00047 610 SMART sant 15 72 IPR001005 -
Sebi33g00047 610 MobiDBLite consensus disorder prediction 458 610 - -
Sebi33g00047 610 MobiDBLite consensus disorder prediction 515 532 - -
Sebi33g00047 610 MobiDBLite consensus disorder prediction 534 555 - -
Sebi33g00047 610 MobiDBLite consensus disorder prediction 473 514 - -
Sebi33g00047 610 Pfam Myb-like DNA-binding domain 17 50 IPR001005 -
Sebi33g00047 610 MobiDBLite consensus disorder prediction 124 333 - -
Sebi33g00047 610 MobiDBLite consensus disorder prediction 266 289 - -
Sebi33g00047 610 CDD Bromodomain 367 407 - -
Sebi33g00047 610 ProSiteProfiles Bromodomain profile. 367 407 IPR001487 GO:0005515
Sebi33g00047 610 MobiDBLite consensus disorder prediction 124 158 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi33g00047 Bromodomain 1.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi33g00047 - - gmx:100779988 725.317