LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi33g00045	ATGTGGAGATTTAAGCCATTCATGCACAAAGAGCCAACTGGTCTTGAAGGTCGTTCTATAGACGTTGGAAATCTTAAAATACATGTCCACAAGGCCATTGCTGAAGGAGGGTTCTCGTGTGTCTACTTAGCTCGTGATGCTGTACATATGTCAAAACAATATGCTTTGAAGCACATAATATGCAATGATGAAGAATCACTTGGATTAGTAAAGAAGGAGATATCTGTGATGAAGTTGCTGGTAGGCCATCCGAATGTCGTCACACTTCATGCACATACAATCTTTGATATGGGTAGGACAAAAGAGGCATTCCTTGTCATGGAATTTTGTGACAAGTCTCTGGTCAATGTGCTGGAGAGCCGGGGAGTTGGTTATTTTGATGAGAAACAGGTTCTTTTAATCTTTAGGGATGTTTGTAACGCAGTTTTCGCTATGCACTGCCAGTCCCCACCTATTGCTCACCGAGACTTGAAAGCGGAGAATCTTTTATTAGGTTCAGATGGTTTGTGGAAGTTGTGTGATTTTGGAAGCACTTCCACCAATCACAAACGTTTTGAGAAGCCAGAAGAAATGGGGATTGAGGAAGACAATATCAGGAAATACACAACCCCTGCATACAGAGCACCAGAGATGTGGGATCTGTTCCTGAGAGAAGTCATTAATGAGAAAGTTGATATATGGGCACTTGGTTGTCTCCTTTTTCGTATATGCTACTTCAAAAGTGCATTTGATGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCAGATTTACCTAAATACAGTTCATCTGTCACGGACTTAATCAGAGACATGCTTCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGTTTGGTTTCGTGTCAATGAGCAGTTACCTGTTAATTTACAAAAGTCATTACCTGACAGACCACCTGAATCGCCCTCTTCCAACAATCACGAAGGTGCTTCAATGTCCACAAACAAATCACCTCCAATGCCTCGTAGGAATCCACCTCCTCCACCTTCAGTTGGAGAACCCAAAACTGCACCTCAGCCATCCCCTGCTTCTAGGGGTGGGGGAACTGGGGGGCAGCTTGGTGCTTTCTGGTCCACTCAGCATGCAAAGGATTCACTTGTCCTTGAGGAAAAGGGCAAACCTATATATGATGAAGAACCATCTAGCCACCATATGTCATCAAAACATGATAGAGTCCGTCCCGACCATGATCAATTACCAAAAAATGTTAATACTAACAAAGTGGTTAACACACAAACTCATACTGTAAAAAGCAGTATACATGGAAAATTACATAAGCCTGATACTGTATCATCAAAGGACTTTGAAATAAATTTTTTTCAGGATAAAGATAATGCAAGTGAGAGGCGAATGTCAAATATGGAGAATAATGCTAACTTTCAAGACCAGGCTTTCAACACTTTTGTTGCAGAATTTGATACCACTAAGCTCAAATCTGGATTTGGTAACAAATCCGAAAGGGAAGAAGCATTAGAGGCTGAGGTTGAGAAACTCAAAGAGCAGCTGAAGGAAGCTTACTTGGAGAAAGCTGAAATAACTTCAAAGTATGAAAAGCTTTCTGCTATCTGCCGATCGCAAAGGCAAGAATTACAGGATCTCAAACAAGCACTTGCAGCAAGGACTCCATCACCATGCAGAGAGGGTTTGAGAACCTCTCCTGGAGTTACATCACCTGCATCTTCGAGGGAGAAGATTGGCGGGACTGCTTGGGAACTTCAGCAGGATAAAAATGAATGGAAAACTCCTAGTTCAGAACCAAAGTCATGGCAAGCTTTTCCGGAGGAACCTGAACCAGTAAAATCCTTTTCAGCTGACAGTTCTTCTAAATCTGTCAGGTCAAGAAATGGTCAGCAGAACAAGCAGCCTACTCAAATAGCTTCTGATTTCGATACATGGGGTTTTGGGACAGAGAAATTCAGTGCTGTACGTGCTGGCAGCCCACAGATGCCATTACCTAGTGAAGGGAGTAAAGGTCAGGTGTTTGGTGAGACAAAGGCCTTTGATAGCAAGTCAACTTCTCAACCTGCAGGATGGGCTGGTTTTTAA	2079	0.4266	MWRFKPFMHKEPTGLEGRSIDVGNLKIHVHKAIAEGGFSCVYLARDAVHMSKQYALKHIICNDEESLGLVKKEISVMKLLVGHPNVVTLHAHTIFDMGRTKEAFLVMEFCDKSLVNVLESRGVGYFDEKQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSSVTDLIRDMLQARPDDRPDITQVWFRVNEQLPVNLQKSLPDRPPESPSSNNHEGASMSTNKSPPMPRRNPPPPPSVGEPKTAPQPSPASRGGGTGGQLGAFWSTQHAKDSLVLEEKGKPIYDEEPSSHHMSSKHDRVRPDHDQLPKNVNTNKVVNTQTHTVKSSIHGKLHKPDTVSSKDFEINFFQDKDNASERRMSNMENNANFQDQAFNTFVAEFDTTKLKSGFGNKSEREEALEAEVEKLKEQLKEAYLEKAEITSKYEKLSAICRSQRQELQDLKQALAARTPSPCREGLRTSPGVTSPASSREKIGGTAWELQQDKNEWKTPSSEPKSWQAFPEEPEPVKSFSADSSSKSVRSRNGQQNKQPTQIASDFDTWGFGTEKFSAVRAGSPQMPLPSEGSKGQVFGETKAFDSKSTSQPAGWAGF	692

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi33g00045	692	MobiDBLite	consensus disorder prediction	330	347	-	-
	Sebi33g00045	692	PANTHER	SERINE/THREONINE PROTEIN KINASE	1	674	-	-
	Sebi33g00045	692	MobiDBLite	consensus disorder prediction	301	366	-	-
	Sebi33g00045	692	MobiDBLite	consensus disorder prediction	387	413	-	-
	Sebi33g00045	692	MobiDBLite	consensus disorder prediction	301	329	-	-
	Sebi33g00045	692	Coils	Coil	492	547	-	-
	Sebi33g00045	692	CDD	STKc_GAK_like	26	298	-	-
	Sebi33g00045	692	SMART	serkin_6	27	291	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sebi33g00045	692	MobiDBLite	consensus disorder prediction	549	692	-	-
	Sebi33g00045	692	ProSiteProfiles	Protein kinase domain profile.	27	297	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sebi33g00045	692	Gene3D	Transferase(Phosphotransferase) domain 1	11	306	-	-
	Sebi33g00045	692	MobiDBLite	consensus disorder prediction	387	411	-	-
	Sebi33g00045	692	MobiDBLite	consensus disorder prediction	585	599	-	-
	Sebi33g00045	692	MobiDBLite	consensus disorder prediction	612	641	-	-
	Sebi33g00045	692	Pfam	Protein kinase domain	28	289	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sebi33g00045	692	SUPERFAMILY	Protein kinase-like (PK-like)	28	343	IPR011009	-
	Sebi33g00045	692	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	152	164	IPR008271	GO:0004672\|GO:0006468
	Sebi33g00045	692	FunFam	probable serine/threonine-protein kinase DDB_G0280111	10	305	-	-
	Sebi33g00045	692	MobiDBLite	consensus disorder prediction	676	692	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi33g00045	Sebi-Chr33	2053963	2057409	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi33g00045	26	292	Miscellaneous Gene Families	AT2G34180	29.537	2.33e-20	93.2

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NAK	Sebi33g00045		Pkinase	7.8e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi33g00045	K08853		-	gmx:100808507	1079.7