Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi339g00049 ATGGGGTTCAGATATCTTCGTCTCAAAGTCAAGGCATTTCGGCTGAAACGGTTTCTGCTACTGCTAGGACTTGGAGGAAGAAAGAGAAAGCACTTGCTAGCAAAGAAGCCTTCATGGATGATGCCAATAACACATGGTTATTATGTGGTGGAACATCATATGATCAGAGATGGTTCTGATGGCTCAGACCTTGATTCAGTTGTGGTACAAAGAGAGCAAATTGGTCATACAGAATTGTGGTATTTTGGAATCTTTGATGCACTAATTGGAGAAAGAGTCACCAAATACATGCAATCTCATTTCTTTGCCAAGAAGCTTCAAGAGGCTCATATAAGGAGAAAGAGCAAAGATACACTGAAGAGAGCTTATCTTGGTGTAAGGACAAAGATCAGAGAGGAACACAGATCAGAAGAGACATGCAGAATGGGTTCAGCATCTGTTATGGTAATCAATGGAGAACAACTTGTAATAGCTAACATGGGAGATTATAGAACTGTTGTTTGTAGAGATGGCATAGCTTATCAAACAACTGGCACATACCAACAATCAGCCAAAAGACATTGGTCTCGCAGACTCTTTGCAGGAAATGCAATAGGTACAAGGCATTCTAGAGGCTCTGAACTTGTCGTAAGAGGTGAAAGGGTTGATTCTGATACTGAATTTTTTATATTAGCAAGCAATGGCATATGGGAGGTGATGAAGAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCACAAGAAGCAGCTGAGTGTTTGGCAAAGGAAGCATTAATTAGGATGAGTAGAAGCAACATCTCATGCTTAATAATTCGCTTTGACTGA 831 0.4067 MGFRYLRLKVKAFRLKRFLLLLGLGGRKRKHLLAKKPSWMMPITHGYYVVEHHMIRDGSDGSDLDSVVVQREQIGHTELWYFGIFDALIGERVTKYMQSHFFAKKLQEAHIRRKSKDTLKRAYLGVRTKIREEHRSEETCRMGSASVMVINGEQLVIANMGDYRTVVCRDGIAYQTTGTYQQSAKRHWSRRLFAGNAIGTRHSRGSELVVRGERVDSDTEFFILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMSRSNISCLIIRFD 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi339g00049 276 ProSiteProfiles PPM-type phosphatase domain profile. 44 275 IPR001932 -
Sebi339g00049 276 SMART PP2C_4 51 273 IPR001932 -
Sebi339g00049 276 CDD PP2Cc 65 275 IPR001932 -
Sebi339g00049 276 PANTHER PROTEIN PHOSPHATASE 45 274 IPR015655 GO:0004722|GO:0006470
Sebi339g00049 276 SUPERFAMILY PP2C-like 66 276 IPR036457 -
Sebi339g00049 276 Gene3D - 50 276 IPR036457 -
Sebi339g00049 276 Pfam Protein phosphatase 2C 215 268 IPR001932 -
Sebi339g00049 276 Pfam Protein phosphatase 2C 81 184 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi339g00049 Sebi-Chr339 844827 846642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi339g00049 1 275 PP2C-type Phosphatase Gene Family AT3G23360 48.214 4.42e-82 246