Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi339g00034 ATGGGTTTGAAGAAGGGTCCTTGGTCTCCTGAGGAAGATCAAATCCTCACTTCTTACATCCAAAAACATGGCCATGGCAATTGGCGTGCCCTCCCCAAGCAAGCAGGCCTGTTAAGGTGTGGAAAGAGCTGTAGACTGCGGTGGATTAACTATTTAAGGCCTGATATTAAGAGAGGAAATTTCACAAATGAAGAGGAGGAAACTATCATTAAGCTGCATCAAATGCTGGGGAACAGGTGGTCAGCAATTGCAGCAAAATTACCAGGAAGAACTGACAATGAAATAAAAAATGTGTGGCACACCCATTTGAAGAAGAGGCTCCAACCAAATTCAGATACCAAAAGAGTATCTAAACCAAAAATCAAACGTTCTGATTCAAATTCAAGCACCATAACTCAATCAGAACCTGCTAGTCTTAATTTCCGTGAGATGGAGACTACATCAGCATGCACTAGTTCTAGTGATTTTTCATCAGTGACGGGTGTTGAAAGCAAAAACATCAAGAGTGAAGACATAGAGTCTATGGAGACAATGCCTGAAATTGATGAGAGCTTTTGGTCAGAAGCAGCAATGGATGAAACCCCTACCATGTCATCAAAATCTTTGACAATCTCAAATGAGATACAATTTAATTATGAGGAAACTTTCCAACAGAGTTATGATTCAAACTTTGACGATGGTATGGATTTCTGGTATGACATATTCATCAGAACTGAGGATCCAATAGAATTGCCACAGTTCTGA 744 0.4019 MGLKKGPWSPEEDQILTSYIQKHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTNEEEETIIKLHQMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLQPNSDTKRVSKPKIKRSDSNSSTITQSEPASLNFREMETTSACTSSSDFSSVTGVESKNIKSEDIESMETMPEIDESFWSEAAMDETPTMSSKSLTISNEIQFNYEETFQQSYDSNFDDGMDFWYDIFIRTEDPIELPQF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi339g00034 247 ProSiteProfiles Myb-like domain profile. 1 52 IPR001005 -
Sebi339g00034 247 MobiDBLite consensus disorder prediction 123 145 - -
Sebi339g00034 247 MobiDBLite consensus disorder prediction 106 145 - -
Sebi339g00034 247 ProSiteProfiles Myb-like domain profile. 53 103 IPR001005 -
Sebi339g00034 247 FunFam Transcription factor MYB15 59 132 - -
Sebi339g00034 247 SMART sant 57 105 IPR001005 -
Sebi339g00034 247 SMART sant 4 54 IPR001005 -
Sebi339g00034 247 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 197 - -
Sebi339g00034 247 MobiDBLite consensus disorder prediction 106 122 - -
Sebi339g00034 247 CDD SANT 60 103 IPR001005 -
Sebi339g00034 247 CDD SANT 7 52 IPR001005 -
Sebi339g00034 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 107 IPR017930 -
Sebi339g00034 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 52 IPR017930 -
Sebi339g00034 247 Gene3D - 59 134 - -
Sebi339g00034 247 Gene3D - 4 57 - -
Sebi339g00034 247 FunFam Myb transcription factor 2 58 - -
Sebi339g00034 247 SUPERFAMILY Homeodomain-like 1 99 IPR009057 -
Sebi339g00034 247 Pfam Myb-like DNA-binding domain 58 103 IPR001005 -
Sebi339g00034 247 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi339g00034 Sebi-Chr339 625785 627344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi339g00034 1 247 MYB Transcription Factor Family AT2G31180 50.000 1.36e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi339g00034 Myb_DNA-binding 6.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi339g00034 K09422 - gmx:100807569 394.815