Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi339g00025 ATGACAAGCCTAGCGGTGAAGGTCAATAGGGCGAAGCTCTCGGCATGCTTGACGTGTCGTTTGTGCAATAAATGGTTCAAAAACGCCACCACAATATCAGAATGCTTGCATACTTATAAACTTATATACGGTGTGCTTGGTATGATTGTAAGAGAGTCTGCTTGTGGGGTGAACATGGGAAGGGAATGTATAGATAAGAAGCTAATAGATGAGAAACTAAAGAACTGTCCAGTATGCAATGTAGACTTGGGTTGCTCTCCATTGGATAAATTAAGGGCAGATCACAGTCTGCAATATTTGAGGGAGAAAATTTTCCCCAGTGACTCTGAAGAAAAATCTGCTAAGGCACCTGAAAATGTCGATTCAGACACAGTGCCAGCCAAAAGAAAGAAAAAATCTCCATCTTCATTGAAAGCCAATGCAAGAAGAGCTAAAGCTGCTGCTGCAGTAGAAGTTATCACTCCACAAGAACCAGAGTTGCCTGCTTCTGAACCTGATAAAGTGGAAGATGCTAAGCAAGATGAAAAACAGCAAAGTGGGATAGAAATTTTGGATGAAGTTTCTACAATTCTATCTGCAAGAAGAGCAAAAGCTGCAGCAAGAAGAAAATTTATTCCATATGAATTAACTCCTCCTTGTCAACCTGACAAAGTAACAGGAAGTGAAAAGAAAGATGATGACTGTCTCCAGCTTGAAACTCTCATTGAGACTTCCAAAACCATTCTTCAGAATTGTTCAAAACCAGATTCAAGTCAAGAAATAGTGCCCAACAACAAGACTTCAGGGGACAGTGGTGAGTTATGGAAACAAAATGCTGATGTGATGTGTGAACCAATGAATTTCCAGCAGGAAATTGCAAGCAAAAACAAATCTCATAATAAGCCTACCATGCAAGAAAATGCTGTGATTCCTGTGCTTGTGGACTCTAGTGACAATGACTCTCAGGTGCCTAAGGTCAAAGAAAAGAAACATTGTCACCGAATAGAAGCAGCTTCTGACAAAAATGAATCACCTCCTCCTCCTCCAAAATCAGATTCATTAGAACTCAAAAGGCTGCACAGCAGCACCCAAGGAAAAACACTCCAAATCTCTGAGGACTTGAATCTTCCAGCACAACCTGTGATTTTTTCAAACTACGAAAGCAACATAAGATCTCGTCCAGTCTGGCTCTCATTGGTTGCTTCTGAAGAGAAGGATGTAGGTGCACAATTGCCTCAATTACCTTACCGCTACCTAAGGATCAAGGATGGTAGTTTACCTGTTTCCTTTATCAAAAAGTATCTGATAATGAAGCTTGGTCTTGCTAGCGAAGCTGAGGTGGAGATCTCATTTCAAGGCCAGCCAGTTCCATCTTCATTGCAACTGCAAAGCTTGGTAGACTTGTGGTTGCAAACAATGCCAACTTATGAGATTCGGACATGTTTTGAAAGCTCAGCTAAGGATTTTGTTATGGTCCTTTCATACAGTCGAAAGGCTTGA 1479 0.4104 MTSLAVKVNRAKLSACLTCRLCNKWFKNATTISECLHTYKLIYGVLGMIVRESACGVNMGRECIDKKLIDEKLKNCPVCNVDLGCSPLDKLRADHSLQYLREKIFPSDSEEKSAKAPENVDSDTVPAKRKKKSPSSLKANARRAKAAAAVEVITPQEPELPASEPDKVEDAKQDEKQQSGIEILDEVSTILSARRAKAAARRKFIPYELTPPCQPDKVTGSEKKDDDCLQLETLIETSKTILQNCSKPDSSQEIVPNNKTSGDSGELWKQNADVMCEPMNFQQEIASKNKSHNKPTMQENAVIPVLVDSSDNDSQVPKVKEKKHCHRIEAASDKNESPPPPPKSDSLELKRLHSSTQGKTLQISEDLNLPAQPVIFSNYESNIRSRPVWLSLVASEEKDVGAQLPQLPYRYLRIKDGSLPVSFIKKYLIMKLGLASEAEVEISFQGQPVPSSLQLQSLVDLWLQTMPTYEIRTCFESSAKDFVMVLSYSRKA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi339g00025 492 MobiDBLite consensus disorder prediction 108 180 - -
Sebi339g00025 492 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 130 IPR013083 -
Sebi339g00025 492 Gene3D - 376 469 - -
Sebi339g00025 492 MobiDBLite consensus disorder prediction 303 355 - -
Sebi339g00025 492 MobiDBLite consensus disorder prediction 246 265 - -
Sebi339g00025 492 MobiDBLite consensus disorder prediction 108 130 - -
Sebi339g00025 492 MobiDBLite consensus disorder prediction 314 333 - -
Sebi339g00025 492 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 5 491 IPR044807 GO:0004842
Sebi339g00025 492 MobiDBLite consensus disorder prediction 162 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi339g00025 Sebi-Chr339 495771 499705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi339g00025 4 415 C3H Transcription Factor Family AT2G30580 30.622 2.60e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi339g00025 K16277 - qsu:112004742 293.123