Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi338g00051 ATGGAGATTGATCTTGAGCTGCCTATATGTGAGCATGAGAAGTTTGATATTGAATCTAATGGAAATGATGTTGCCGATACTGTATGTGATATACATGTTGAGGTGCAAAACAATAATCCTTCTTCAATGACTGAACACTACAAGGAAGTTTTGAGTGAAAATGCTTTCTGTTACCAGGATCAGGTAGATTTGAATTCCAATCAGGTAGATACTATCGATAAAAATGGCTTTAAAGAGCCACAGAATGGCTTGGAGTTTGAATCAAAGGAGGCTGCCTATTCTTTCTACAGAGAATATGCTCGCACAGTGGGATTTGGTATCACAATAAAAGCCAGTCGACGCTCAAAAAAGTCTGGTAAATTCATTGATATTAAAATTGCTTGTTCCAGGTTTGGAAGCAAGCGTGAGTCTGGTACAAAAGTTAATCCACGACCATGTATGAAGACAGACTGCAAGGCTGGCATGCACATGAAGAAGAAGCTAGATGGTAACTGGATCATATACAATTTTGTAAAAGAGCACAATCATGAGATCTGTCCAAATGATTTCTTGAGGGGGCGGAGCAAACAAACAAGTAATGTAGCTTGTCAGAAGAAGGGTATGCAATTGGCTCTAGACAAGGGAGATGTGCAGTTTGAAAAGAGATGGTGGAAACTGATCAATAGATTTGAACTAAAGAACAATGAATGTGTTCAATCATTGTATGAAGATCGTAAGAAGTGGGTGCCCACATTCATGCAGGATGTTTCTCTGGTGGGATTGTCAACAACTGTAAGGTCTGAAAGTACAACCTCATCCTTTGACAAGTATATTCGTGTTGATTCTACCTTTAAGGAGTTTATTGAACAGTATAAAGTTTTCTCTACTCACAGTTTTGACATGGAAGCCAAAGCTGACTTTGAGACAAGACAAAGGCAACTTGCATTAAGATCTCTATCACCTTTTGAGAAACAGCTATCTACAATTTATACAGATGTCATATTTAGAAAAATTCAGTTGGAGATAGTGGGAGCAGTATCTTGTTGTCTCCGGAAGGAAACAGAAGACAGAACAAATGTAACATTTCTTGTTGATGACTTTGAGGAGAGGAAGAAATTTGTTGTTTCTTGGAACAAGGCAGATTTGGTTGTCTGTTGTTCATGTCATTTATTTCAATACAAAGGCTTTCTATGTAGACATGCAATACTTGTCATTCAGATGTCTGGTATTACCAACATTCCATCCCGTTATATCTTGAAACGATGGACAAAAGATGCAAAGGCCTATCAGTTTGCTGGTGACCTAATTAGCAGGGCTGCTAGTCGAATGCAACGTTTTAATGACCTTTGTAGGCGGGCAATTATATTAAGTGAAATTGGGTCATTTTGTGAAGATTCTCACCGCATTGCGTCTCAGGCACTGGAAGAAGTCTATAAGCATTGTATGAATGCAAACAATTCTACTAGAAGCACTTTAGAGCCCAACAACTTGGCTCTTAATGGTTTTGTTGATGTTGAAGAGAAGAATTATGGCTTCCATAGGACAAAGTCTACAAAGAAAAGGAAGTCATATAATAAAAGGGAATGCTCTGGTCCAGAAAGAATCAATATCAAGATGCTGGACAGCTTCCAAAAAAGGGAACAGAGAATTTCGAGAGCACACAACTTTGATAATTGTTACATTTCTCAACAGGACACAAAAACAGTGCACTTGGATTCTAGAGCTTCAACTCTTGATAGCTATTATGGGGCTCAACAGAATGTTCTTGGAGACGCGCAGCTGAACTCAGTTTCTGTCATGCATGACAACGACTATTATAGCAGTCAACAGGCCATTCTCGGGCTGGGGCAAATGCAATCCGTGCCGAGCGGTGGTCCACATTATGGGATGCAGCACAGCGTGCAAGGACTGCTTCAGGGACAGCATATTTTCAGAACGCCAACAGTGCACGGATGTTTTGACCTTCAAGATAGTCTAGAGGATATGGAACAACCACTTATTAGGGCCTCACAGTGCCAAGGCATTCCATCAAAGCAACTTGCTGTTGATAAACCACTTTCCTGA 2043 0.3994 MEIDLELPICEHEKFDIESNGNDVADTVCDIHVEVQNNNPSSMTEHYKEVLSENAFCYQDQVDLNSNQVDTIDKNGFKEPQNGLEFESKEAAYSFYREYARTVGFGITIKASRRSKKSGKFIDIKIACSRFGSKRESGTKVNPRPCMKTDCKAGMHMKKKLDGNWIIYNFVKEHNHEICPNDFLRGRSKQTSNVACQKKGMQLALDKGDVQFEKRWWKLINRFELKNNECVQSLYEDRKKWVPTFMQDVSLVGLSTTVRSESTTSSFDKYIRVDSTFKEFIEQYKVFSTHSFDMEAKADFETRQRQLALRSLSPFEKQLSTIYTDVIFRKIQLEIVGAVSCCLRKETEDRTNVTFLVDDFEERKKFVVSWNKADLVVCCSCHLFQYKGFLCRHAILVIQMSGITNIPSRYILKRWTKDAKAYQFAGDLISRAASRMQRFNDLCRRAIILSEIGSFCEDSHRIASQALEEVYKHCMNANNSTRSTLEPNNLALNGFVDVEEKNYGFHRTKSTKKRKSYNKRECSGPERINIKMLDSFQKREQRISRAHNFDNCYISQQDTKTVHLDSRASTLDSYYGAQQNVLGDAQLNSVSVMHDNDYYSSQQAILGLGQMQSVPSGGPHYGMQHSVQGLLQGQHIFRTPTVHGCFDLQDSLEDMEQPLIRASQCQGIPSKQLAVDKPLS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi338g00051 680 ProSiteProfiles Zinc finger SWIM-type profile. 364 402 IPR007527 GO:0008270
Sebi338g00051 680 Pfam FAR1 DNA-binding domain 94 179 IPR004330 -
Sebi338g00051 680 Pfam SWIM zinc finger 378 400 IPR007527 GO:0008270
Sebi338g00051 680 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 192 IPR031052 GO:0006355
Sebi338g00051 680 SMART 26again6 377 404 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi338g00051 Sebi-Chr338 773535 776756 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi338g00051 FAR1 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi338g00051 - - gmx:100802811 639.417