LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi338g00016	ATGGGTTCTGAGGTGGGTGATGTTTCCACCGCCAGTAAATGGCTGGGTTTCGTGGCGGCCGTTTGGATTCAAGCAATCTCCGGCAACAACTACACATTCTCCAATTACTCCGATGCTTTGAAATCCCTAATGCATCTCACTCAGATTCAGCTCAATAATCTCTCCGTAGCCAAAGATGTTGGCAAGGCTTTTGGGCTTCTTGCTGGCCTTGCCTCTGACCGATTCCCAACTTGGGCTATTCTTCTCATCGGCTCCATCGAAGGCCTCATCGGCAATGGAGTTCAATGGCTCGTCGTTAGCCACAGGATTCAACCCCTTCCCTACTGGCAGATGTGTATCTTTCTCTGCATGGGTGGCAACTCCACAACCTGGATGAACACCGCCGTTTTGGTCACTTGCATGCGCAATTTCCGGCGAAATAGAGGCCCTGTTTCCGGCATTCTCAAAGGCTATGTCGGGTTAAGCACCGCCATATTCACCGACCTTTGCTCTGCTCTCTTCGCCGACGACCCTGCTTCCTTCCTCATCATGCTCTCTGTAGTTCCATTCGCCGTTTGCCTCACCGGTGTCTTTTTCCTCCGTGAGGTTCCTCCGGCTGATTCCACCGCCGCGCAAGACAAGGAAGAGTCTAGGTATTTCGGCCTTTTCAATGCCGTCGCCGTCGTCGTTGCCGTTTACCTCTTGGTTTACGGCTTCGTGCCCAACCCCTCCACTTTGGTGTCTAGGGTTTTCGCCGTGGTTTTGCTCCTTCTGTTGGCGGCGCCGTTGGGAATACCGGTCTACTCATACTTCAAAGCCCGGTTCAAACCGGGTCTGGATATCGAGGGAAGGGTGAATGAACCGTTGATTCGCAGTCAAGATGAGGGAAATGAAATGGAGGCAGATAACAGAGTAAACAAAGAGACGGAGGTGATAAGGAGGGGACCGGTGGTAGGGGAGGAGCATACCATAGTGGAGGCGCTGAAAACCTTGGATTTTTGGATATTGTTTGTGTCTTTTCTGTGTGGGGTTGGAACGGGTTTGGCAGTTATGAACAATATGGGCCAGATTGGGTTGGCCCTGGGTTACTCAGATGTGTCCATCTTTGTATCTTTGACCAGTATTTGGGGCTTTTTCGGTCGGATCATTTCGGGTTCGGTTTCAGAGTACTTCATCAAGAAAGCTGCAACTCCTAGACCTCTTTGGAATGCAGCTTCTCAAATTGTGATGGCTGTGGGGTACATACTCCTGGCCTTGGCTATGCCTGGTTCCCTTTACATAGGCTCTACCATAGTTGGTATATGCTATGGAGTCCGGCTTGCCATTACTGTCCCAACAGCATCTGAGTTATTTGGCCTCAAATATTATGGTCTCATATACAACATTCTCATCCTTAACCTTCCCTTAGGCTCTTTCCTCTTTTCTGGTCTGCTTGCTGGCATACTGTATGATATGGAGGCAACTACCACTGCAGGAGGAGGCAACACTTGCATTGGAGCTCATTGTTACAGGCTAGTGTTCATAATCATGACTGCAGCTTGTATTGTTGGGTTCTTGTTAGACATTCTATTATCAATCAGAACAAAGAATGTTTACCACAAGATTTCCTTGAGCAAAAAAACCAAGAAATCCTCACAGACATCAAGTAGTCGATGA	1635	0.4887	MGSEVGDVSTASKWLGFVAAVWIQAISGNNYTFSNYSDALKSLMHLTQIQLNNLSVAKDVGKAFGLLAGLASDRFPTWAILLIGSIEGLIGNGVQWLVVSHRIQPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPASFLIMLSVVPFAVCLTGVFFLREVPPADSTAAQDKEESRYFGLFNAVAVVVAVYLLVYGFVPNPSTLVSRVFAVVLLLLLAAPLGIPVYSYFKARFKPGLDIEGRVNEPLIRSQDEGNEMEADNRVNKETEVIRRGPVVGEEHTIVEALKTLDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSIFVSLTSIWGFFGRIISGSVSEYFIKKAATPRPLWNAASQIVMAVGYILLALAMPGSLYIGSTIVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTAGGGNTCIGAHCYRLVFIIMTAACIVGFLLDILLSIRTKNVYHKISLSKKTKKSSQTSSSR	544

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi338g00016	544	SUPERFAMILY	MFS general substrate transporter	16	523	IPR036259	-
	Sebi338g00016	544	CDD	MFS_Mch1p_like	12	510	-	-
	Sebi338g00016	544	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	14	526	-	-
	Sebi338g00016	544	Pfam	Nodulin-like	13	260	IPR010658	-
	Sebi338g00016	544	Gene3D	MFS general substrate transporter like domains	319	524	IPR036259	-
	Sebi338g00016	544	Gene3D	MFS general substrate transporter like domains	11	205	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi338g00016	Sebi-Chr338	303103	305401	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi338g00016	11	537	Nodulin-like Gene Family	AT4G34950	71.091	0.0	800

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi338g00016	-		-	gmx:100813607	809.675