Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi338g00009 ATGGATCAATATCTCCGCCCTGACCTCAAACGTGGCAATTTCACCCAACAAGAAGATGAACTCATCATCAAACTCCATAGTCTCCTTGGTAACAAGTGGTCTCTAATAGCTGGAAGATTGCCTGGGAGAACAGACAATGAGATAAAGAATTACTGGAATACTCACATAAGAAGGAAGCTTTTGAGCAGAGGAATTGACCCTGCAACTCACAGGCCTCTCAATCAAGAATCAATTACTGCTAGTGCCAACACAATATCTTTCGCTTCTGAAGAACAAGAGAATAATAAAGAACGCTGCCCTGACTTGAACCTTGACCTTACCATTTGTCCTCCACATCATGATGATCAGAGTATAGAGATCAGAAGCCTTTGCTTTGGCAACACTGTTACTGGTGTTGGTGAGACCATCATCGACACTGCTACTGGTTACGATTTCTTGGGCTTGAAAACCACCACTACTGCTCTCGATTACAGAAGCAAAAGCAAGCTTGGAAATGAAATTCAATTAAATTTAGTTGGAGAGGAATGA 528 0.4186 MDQYLRPDLKRGNFTQQEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNQESITASANTISFASEEQENNKERCPDLNLDLTICPPHHDDQSIEIRSLCFGNTVTGVGETIIDTATGYDFLGLKTTTTALDYRSKSKLGNEIQLNLVGEE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi338g00009 175 CDD SANT 13 56 IPR001005 -
Sebi338g00009 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 60 IPR017930 -
Sebi338g00009 175 ProSiteProfiles Myb-like domain profile. 6 56 IPR001005 -
Sebi338g00009 175 Gene3D - 13 98 - -
Sebi338g00009 175 SMART sant 10 58 IPR001005 -
Sebi338g00009 175 SUPERFAMILY Homeodomain-like 3 62 IPR009057 -
Sebi338g00009 175 Pfam Myb-like DNA-binding domain 11 55 IPR001005 -
Sebi338g00009 175 PANTHER F14D16.11-RELATED 3 95 - -
Sebi338g00009 175 FunFam Myb transcription factor 12 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi338g00009 Sebi-Chr338 153153 153766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi338g00009 4 159 MYB Transcription Factor Family AT2G16720 47.596 1.31e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi338g00009 Myb_DNA-binding 8.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi338g00009 K09422 - tcc:18607558 195.667