Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi337g00026 ATGATGTTAGAAAATGAAGGTGGATCCAATGTGGGCTTCTTGTCTGATCATAAAGATGCGGAGAAGATGATAAGCATCAACCAAATTGGATCAGAATTAGGAATTGTTGTGGTGAATAATAATAAGCAATCACTAAAAGGGAAGAATGTTGCTGTTGCTACTACTGATCAAGGGAATGATATTAATGATGGAGACACTACTCGCGATACTGCTCATATATGGACTGAGAGAGAAAGAAGGAAGAAAATGAGAAACATGTTCTCTACCCTTCATTCTATGCTTCCTCACCTTCCTCCTAAGGCAGATAAATCAACCGTTGTGGATGAAGCAGTGAGCTACATACAACATCTTGAGCAAACTCTTGAAAAGCTAGAGAAGCAGAAACAAGAAAGGCTCCAATATGTGTCCACCAATGCTACTTTTGGGTGTGACTCATCTGTGATACACTCACAGTCACAGTGGCATCCCTATGACCCATCATTAATAACTGCTGGTGATCAAGGATCATCTTCCAATAACAACTACTTGTCCAATATTACTGCAGTTAATGGAACTTCAAACAATAATGGATTACAGCCTGCAGTAGCATTTCAAACATGGACTTCTCCAAATGTGGTATTGAACATTTATGGAGATGAAGCACAATTCTGCATATGTGCGACCAAGAAGCCTGGCATCTTGACCACCATCGCTTATGTGCTCGAGAAGTACAACATTGAGATCCTATCTGCCAACATTTTGTCCAATAATGGAAATGCATACATGATTCAAGCCCATGCAAAACGAGCTTCAACCCAGTTCCAAGAAGCAAAATTAGTGGAGCAAATGTATAGGCTAGCAGCGGGAGAAATCACCCTATGGATCACCTAA 870 0.4046 MMLENEGGSNVGFLSDHKDAEKMISINQIGSELGIVVVNNNKQSLKGKNVAVATTDQGNDINDGDTTRDTAHIWTERERRKKMRNMFSTLHSMLPHLPPKADKSTVVDEAVSYIQHLEQTLEKLEKQKQERLQYVSTNATFGCDSSVIHSQSQWHPYDPSLITAGDQGSSSNNNYLSNITAVNGTSNNNGLQPAVAFQTWTSPNVVLNIYGDEAQFCICATKKPGILTTIAYVLEKYNIEILSANILSNNGNAYMIQAHAKRASTQFQEAKLVEQMYRLAAGEITLWIT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi337g00026 289 CDD bHLH_AtbHLH_like 72 125 IPR045239 -
Sebi337g00026 289 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 48 288 IPR044278 GO:0003700|GO:0006355|GO:0009960
Sebi337g00026 289 Pfam Helix-loop-helix DNA-binding domain 70 118 IPR011598 GO:0046983
Sebi337g00026 289 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 132 IPR036638 GO:0046983
Sebi337g00026 289 Gene3D - 60 133 IPR036638 GO:0046983
Sebi337g00026 289 Coils Coil 107 134 - -
Sebi337g00026 289 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 117 IPR011598 GO:0046983
Sebi337g00026 289 SMART finulus 75 123 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi337g00026 Sebi-Chr337 1028348 1031199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi337g00026 59 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 46.119 2.49e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi337g00026 HLH 8.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi337g00026 - - gmx:102665879 239.58