Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi337g00024 ATGACATTAGAAGATGAAGGTGGCTCAATTGTGGGCTTCTTGTCTGATCATAACGACGCGGAGAAGATGATAAGCAACAACCAAAATGGATCAGAATTAGGAATTGTTGTGTTGAATCATAAGCGATCACTAAAAGAGAAGAATGTTACAGTTGCTACTACAGATCAAGGGAATGATATTAATGATGGAAACACTACTCGTGATGCTGGTCATATATGGACTGAGAGAGAAAAAAGGAAGAAAATGAAGAACATGTTCTCTACCTTTCATTTTATGCTTCCTCACCTTCCTCCAAAGTTAAGAAATCTTATAAAGGACACAAACCTCTCTATTTTCCTTGTACTTTTTATTCCCTTATCAGATGAAGCAGTGAGCTACATACAAAATCTTGAGCAAACTCTTGTAAAGTTAGAGAAGCAGAAACAAGAAAGGCTCCAATATGTGTCCACCAATGCTACTTTTGGGTGTGACTCATCTGTGATACACTCACGGTCACTGTGGCATCCCTATGACCCACCCTTGATAACTGCTGGTGATAAAGGATCATCTTCCAATAACAACTACTTGTCCAATATTACTGCAGTAAATGGAACTTCAAACAATAATGGATTACAGCCTGCAGTAGCATTTCAAACATGGACTTCTCCAAATGTGGTATTGAACATTTATGGAGATGTAGCACAATTCTGCATATGTGCAACCAAGAAGCTTGGCATCTTGACCACCATCACTTATGTGCTTGAGAAGTACAACATTGAGGTCCTATCTGCCAACATTTTGTCCAGTAATGGAGATGCATACATGATTCAAGCCCATGCAAAACGAGCTTCAAACCAGTTCCAAGAAGCAAAATTAGTGGAGCAAATGCATAGGCAAGCAAGCGAGGGAGATCACCCTATGGATCGCCTAAAGTTTTGA 918 0.3954 MTLEDEGGSIVGFLSDHNDAEKMISNNQNGSELGIVVLNHKRSLKEKNVTVATTDQGNDINDGNTTRDAGHIWTEREKRKKMKNMFSTFHFMLPHLPPKLRNLIKDTNLSIFLVLFIPLSDEAVSYIQNLEQTLVKLEKQKQERLQYVSTNATFGCDSSVIHSRSLWHPYDPPLITAGDKGSSSNNNYLSNITAVNGTSNNNGLQPAVAFQTWTSPNVVLNIYGDVAQFCICATKKLGILTTITYVLEKYNIEVLSANILSSNGDAYMIQAHAKRASNQFQEAKLVEQMHRQASEGDHPMDRLKF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi337g00024 305 CDD bHLH_AtbHLH_like 71 138 IPR045239 -
Sebi337g00024 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 145 IPR036638 GO:0046983
Sebi337g00024 305 Coils Coil 120 147 - -
Sebi337g00024 305 Gene3D - 65 152 IPR036638 GO:0046983
Sebi337g00024 305 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 42 294 IPR044278 GO:0003700|GO:0006355|GO:0009960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi337g00024 Sebi-Chr337 988276 991119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi337g00024 71 272 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 40.278 1.06e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi337g00024 - - gmx:102665879 191.815