Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi337g00023 GCGGATAAATCAACCGTTGTAGATGAAGCAGTGAGTTACATACAAAATCTTGAGCAAACTCTTGAAAAGCTAGAGAAGCAGAAACAAGAAAGGCTCCAATATGTGTCCACCAATACTACTTTTGGGTGTGACTCATCTGTGATACACTCACAGTCAATGTGGCATCCCTATGACCCACCCTTGATAACGACTGGTGATAAAGGATCATCTTCCAATAACAACTACTTGTCCAATATTACTACAGTAAATGGAACTTCAAACAATAATGGATTACAACCTGCAGTAGCATTTCAAACATGGACTTCTCCAAATGTGGTATTGAACATTTATGGAGATGTAGCACAATTCTGTATATGTGCAACGAAGAAGCCTGGTATCTTGACCACCATCACTTATGTGCTCGAGAAGTACAACATTGAGGTCCTATCTGCCAACATTTTGTCCAGTAATGGAGATGCATACATGATTCAAGCCCATGCAAAACGAGCTTCAAACCAGTTCCAAGAAGCAAAATTAGTGGAGCAAATGTATAGGCAAGCAGCGAGGGAGATCACCCTATGGATCGCCTAA 570 0.4088 ADKSTVVDEAVSYIQNLEQTLEKLEKQKQERLQYVSTNTTFGCDSSVIHSQSMWHPYDPPLITTGDKGSSSNNNYLSNITTVNGTSNNNGLQPAVAFQTWTSPNVVLNIYGDVAQFCICATKKPGILTTITYVLEKYNIEVLSANILSSNGDAYMIQAHAKRASNQFQEAKLVEQMYRQAAREITLWIA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi337g00023 189 Coils Coil 7 34 - -
Sebi337g00023 189 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 1 187 IPR044278 GO:0003700|GO:0006355|GO:0009960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi337g00023 Sebi-Chr337 968550 969879 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi337g00023 1 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 38.571 1.32e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi337g00023 - - gmx:102665879 178.333