Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi337g00013 ATGGGAGTCCATGAAAAAAAAGGAGGCAACCCGCCCCAAAGCCATCTTGTAGATTTATTTCGTTCAACTATCCAAGAATGTGGCCTTCAAGACATGGGATTTGATGGGGCTGATTTCACATGGAGTAATCGTTCAAGTGGTGCTAATCTTATCCAAGCTAGACTGGATAGAGCTTTAATGACCCGCGGTTGGCAAGAATTATTTCCAGGAGCTAAAACTACTCATTTGATCCGTCACCAATCCGACCACTCCCCATTACTTATTGATTGTTCACCTAAAGCGCCCAGAAGAAGAAAACTTGAAAGAATTACCCGATTAGAAGAATTGTGGACCACTAATCAAGACTTTATGAATCAGCTAGAGGACTTGAATATCTTCATGAAAAGGCAGAGACTCATTATCCATCGTTACATTAAGTCTAGTAACATAATGCTTTTTGATGATGATGTTGCAAAGATTGCTGGTTTTGATTTGTCAAATCAAGCCCCTGATGCCTGTGTTCTTGGAACCTTTGGTTATCATGCTCCAGAATATGCAATGACTGGGCAACTCACTTCAAAAAGTGATGTTTACAGTTTTGGAGTTATATTGCTGGAACTCTTAACCGGGCGTAAACCTGTTGCTGTTGCTGGCCATTAA 639 0.4085 MGVHEKKGGNPPQSHLVDLFRSTIQECGLQDMGFDGADFTWSNRSSGANLIQARLDRALMTRGWQELFPGAKTTHLIRHQSDHSPLLIDCSPKAPRRRKLERITRLEELWTTNQDFMNQLEDLNIFMKRQRLIIHRYIKSSNIMLFDDDVAKIAGFDLSNQAPDACVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVAVAGH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi337g00013 212 SUPERFAMILY Protein kinase-like (PK-like) 131 207 IPR011009 -
Sebi337g00013 212 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 128 207 - -
Sebi337g00013 212 Pfam Protein kinase domain 130 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi337g00013 212 Gene3D Transferase(Phosphotransferase) domain 1 96 212 - -
Sebi337g00013 212 Gene3D Endonuclease/exonuclease/phosphatase 3 89 IPR036691 -
Sebi337g00013 212 SUPERFAMILY DNase I-like 16 89 IPR036691 -
Sebi337g00013 212 ProSiteProfiles Protein kinase domain profile. 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi337g00013 Sebi-Chr337 396187 399303 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi337g00013 130 207 Receptor kinase-like Gene Family AT4G02010 60.000 1.91e-24 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Sebi337g00013 Pkinase 9.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi337g00013 K13436 - gmx:547595 139.043