Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi337g00011 ATGAAAAGGCAGAGACTCATTATCCATCGTTACATTAAGTCTAGTAACATAATGCTTTTCAATGATGATGTTGCAAAGATTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCCCGTGTTCTTGGAACCTTTGGATATCATGCTCTAGAATATGCAATGACTGGTAAACTCACTTCAAAAAGTGATGTTTACAGTTTTGGAGTTATATTGCTGGAACTCTTACCCGGGGGTAAACCTGTTGTTGTTGCTGTTGCTAGCCATTAA 267 0.382 MKRQRLIIHRYIKSSNIMLFNDDVAKIADFDLSNQAPDARVLGTFGYHALEYAMTGKLTSKSDVYSFGVILLELLPGGKPVVVAVASH 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi337g00011 88 Gene3D Transferase(Phosphotransferase) domain 1 1 86 - -
Sebi337g00011 88 ProSiteProfiles Protein kinase domain profile. 1 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi337g00011 88 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 81 - -
Sebi337g00011 88 Pfam Protein kinase domain 5 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi337g00011 88 SUPERFAMILY Protein kinase-like (PK-like) 6 80 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi337g00011 Sebi-Chr337 332773 333282 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi337g00011 4 81 Receptor kinase-like Gene Family AT4G02010 60.000 1.53e-25 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Sebi337g00011 Pkinase 7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi337g00011 K13436 - gmx:547595 131.339