Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi337g00007 ATGACGTATGATCCTAGAAGAGTTTCTGCTCAGTGGCCTGTAGAAGGGGAACAATTCGGGAGGAAGTTCTGGTTTTCTACTATATTGATGGCTACCCCAAGTAAGTCAGCACCAATAATGTCTTCAGACTCCTTGGAACAGAAAGGGAAAAATATTACTGAATCAAATGTAAACATGCTTCAATGTCCTTTAAACCTGCAACACCATAGCTCCTTAGATGGCCCGGTAGCTATACTTTGGGATATTGAAAATTGTCCTGTTCCAAGTGATGTACGGCCTGAAGATGTAGCAGGTAATATAAGAATGGCTTTGCGGGTGCACCCGGTAATTAAAGGAGCTGTTATGATGTTTTCCGCTTATGGGGATTTCAATGCTTTCCCTAGGCGACTTCGAGAGGGATGTCAGAGAACTGGTGTTAAACTCATTGATGTTCCCAATGGAAGAAAAGATGCTGCCGACAAAGCTATCTTGGTTGACATGTTCTTATTTGCCCTTGACAACCGTCCACCTTCCTCTATCATGCTAATATCTGGAGATGTTGATTTTGCTCCTGCACTTCACATTCTCGGTCAGCGGGGTTATACTGTAGTTCTTGTCATCCCTGCTGGTGTGGGTGTTTCTTCTGCCTTATGCAATGCTGGTAAATTTGTCTGGGATTGGCCTAGTGTGGCTCGTGGAGAAGGCTTTGTTCCCCCCTCAAAGGCTTTAGTGCCACCCCGTGGAGGATCAATTGAGCTTGCTGGATATTTGATGGGGTGCCATATCAATGACAACTCCGATGCACAAAATGAAGAAGAATCAATAGTTTATAGAGGGATGTCACAGAGCTATTATAACTCAAGTGGTTTCTCTATGGTCTCACAATCTCTGTCTGAATACAACTCATCAAACATGCCTTTCTCGCCAACTGTGAGATCACATAGTCTTCCGTCTGGATTGAATGATGTTGCAGGAGGACCTATGCCTTCTAGTGACCACACTGAATGCCAGATATGGGTTCAGCCAGGAGATTTAAATGGTCTAAAGGGCCAACTGGTAAGGTTACTTGAGCTGTCTGGAGGATGCCTGCCTCTGGCCCGAGTTCCAGCAGAGTACCAGAAAATTTATGGGAGACCTCTTTATGTAGCTGAATATGGGGCAATGAAGTTGGTCAATCTTTTCAAGAAGATGGGTGATACCATGGCTGTAGAAGGGAAAGGGCATCGTAAATTTGTGTATCTCAGAAACTGGAAGGCATGCCCAAGTGCTCCTCCGCTGTCTCCTGCAAAGAAAGATAAGAAAGGAAAAGGGGCACAGGAAGAGAATGCAAATGTTGTCACTGGTGGCTGCTCTTCAGATGAGTTCTCAGATGAAGAAAGAGTAGTCATTGAAGAACACGATGAGAGAAGTTGCACAGGAAAGGGCAATCAGGGGAGAGCAGCTAGGTGTGAAGTTGATGACCGTATTATTGAGCAGTTCAAGTATGAGCTGCAAGAGATTCTAGTCAGTTATTCTTGTCGAATATTCCTAGGTTGTTTTGAGGCTATATACCAGCAACGGTACAAGAGACAACTGGAATATCAGAGATTTGGTGTGGACAAGTTGGAGGATTTGTTGGAGAAAGTGAAAGATGTGGTAGTATTGCATGAGGAACCAGTAAGCAAGAGGAAGTTCCTGGCTGCTGTGAGTGGTTAG 1674 0.445 MTYDPRRVSAQWPVEGEQFGRKFWFSTILMATPSKSAPIMSSDSLEQKGKNITESNVNMLQCPLNLQHHSSLDGPVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVDFAPALHILGQRGYTVVLVIPAGVGVSSALCNAGKFVWDWPSVARGEGFVPPSKALVPPRGGSIELAGYLMGCHINDNSDAQNEEESIVYRGMSQSYYNSSGFSMVSQSLSEYNSSNMPFSPTVRSHSLPSGLNDVAGGPMPSSDHTECQIWVQPGDLNGLKGQLVRLLELSGGCLPLARVPAEYQKIYGRPLYVAEYGAMKLVNLFKKMGDTMAVEGKGHRKFVYLRNWKACPSAPPLSPAKKDKKGKGAQEENANVVTGGCSSDEFSDEERVVIEEHDERSCTGKGNQGRAARCEVDDRIIEQFKYELQEILVSYSCRIFLGCFEAIYQQRYKRQLEYQRFGVDKLEDLLEKVKDVVVLHEEPVSKRKFLAAVSG 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi337g00007 557 Gene3D - 478 549 IPR041966 -
Sebi337g00007 557 Gene3D - 337 406 IPR041966 -
Sebi337g00007 557 ProSiteProfiles OST-type HTH domain profile. 482 556 IPR025605 -
Sebi337g00007 557 MobiDBLite consensus disorder prediction 417 436 - -
Sebi337g00007 557 ProSiteProfiles OST-type HTH domain profile. 337 409 IPR025605 -
Sebi337g00007 557 Pfam OST-HTH/LOTUS domain 483 545 IPR025605 -
Sebi337g00007 557 Pfam OST-HTH/LOTUS domain 339 405 IPR025605 -
Sebi337g00007 557 CDD PIN_limkain_b1_N_like 75 201 - -
Sebi337g00007 557 Gene3D - 71 221 - -
Sebi337g00007 557 CDD LOTUS 338 407 - -
Sebi337g00007 557 CDD LOTUS 483 545 - -
Sebi337g00007 557 PANTHER LIMKAIN B LKAP 55 521 IPR024768 GO:0005777|GO:0010468
Sebi337g00007 557 Pfam NYN domain 75 215 IPR021139 GO:0004540
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi337g00007 72 226 C2H2 Transcription Factor Family AT5G61190 41.290 1.60e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi337g00007 - - gmx:100818186 929.472