Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi336g00022 ATGGCTGAGGTTGCTCTCATTGGTTCTGATATACAAGAGGTTATTGGCAGTGCTATTGCTATCAGGATTCTGAGTAATGGACTTGTGCCCCTTTGGGCTGGGGTTGTCATTATAGCTCTTGATTGTTTTATCTTTCTCTTTCTTGAGAACTATGGTCTGAGGTCATTAGAAGCCTTTTTTGCTGTTCTCATTGTTATAATGGCACTAGCGTTCGCATGGATGTTTGGTGAAGCAAAGCCCAGTGGCAAGGAACTTCTTCCTGGCATTGTGGTTCCAAAACTTAGCTCCAGAACTATACAGCAGGATGTTGAAGTTGTAGGCTGCCTTATAATGCCTCACAACGTGTTCTTGCATTCTGCTCTTGTTCAATCAAGGCAGATTGATCACAGAAACAAAAGTCCAGTTCAAGAGGCTCTTAACTATTACTCTATAGAGTCCACACTTGCCCTCATAGTATGGTCCTCGGCGAGGAGATTTGATCAGCCACATAAGTACAAGCCATTTGTAAGCAGATGTGTTGTAAGGGGAAACCTTGAGATTGGGAGTCTGAGAGAAGTTGATGTAAAGTCAGGGCTTCCTGCTACTACAAGTACAGAAAGATTGGAGCTCCTTGATGATGATGAGCATATTCTCAGCATCAGGATATTATTGGTGGTGATCATAGACTTAGGGTAA 675 0.4281 MAEVALIGSDIQEVIGSAIAIRILSNGLVPLWAGVVIIALDCFIFLFLENYGLRSLEAFFAVLIVIMALAFAWMFGEAKPSGKELLPGIVVPKLSSRTIQQDVEVVGCLIMPHNVFLHSALVQSRQIDHRNKSPVQEALNYYSIESTLALIVWSSARRFDQPHKYKPFVSRCVVRGNLEIGSLREVDVKSGLPATTSTERLELLDDDEHILSIRILLVVIIDLG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi336g00022 224 SUPERFAMILY Bet v1-like 152 216 - -
Sebi336g00022 224 PRINTS Natural resistance-associated macrophage protein signature 102 125 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi336g00022 224 PRINTS Natural resistance-associated macrophage protein signature 28 47 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi336g00022 224 PRINTS Natural resistance-associated macrophage protein signature 53 74 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi336g00022 224 Pfam Polyketide cyclase / dehydrase and lipid transport 152 215 IPR019587 -
Sebi336g00022 224 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi336g00022 224 Pfam Natural resistance-associated macrophage protein 1 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi336g00022 224 Gene3D - 124 217 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi336g00022 Sebi-Chr336 958706 960220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi336g00022 1 152 Inorganic Solute Cotransporters AT2G23150 78.947 1.85e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi336g00022 K21398 - gmx:100812381 254.988