Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi336g00014 ATGGCTACAGAGACCAAAAGCAGTACTGTGAAGCTCAAATCAAGTGCCTCAGATGGTTCTTCCAAGGGAAAGGTTGATTCTTCGGCTCTCAAGAAGAAAGTGGACAGCTCAAGCAAGCACCCTTCTGATTCAAAGATGAAATCTGTCACAACTGTTACAAAATCTGAGGTTAAATCCAAAACGACATCATCATCTTCAAAAACAGAAACAAAGACAACTAGTACTACAAAAGTGAGAGAGAGGAAAGTCTACAGTCTGCCTGGACAGAAACATGATCCTCCAGAACAGAAAGAACCCCTGAGGATTTTCTATGAGTCATTATCAAAACAGATACCAACAAGTGAAATGGCAGAGTTTTGGTTAATGGAACACGGGATGCTGTCTCCTGAAAGAGCTAAGAAAGCATTTGAGAAGAAGCAGAGGAAGCAAAAAGAGCTGCGGACAGGAACTCCTGTTAAGCCATCAAAGCCGGTGACTAAAACTGAAACTTCCCAGAAGCAACAGGCATCTAGAAATGGTGAAGCTCAGAATTCAGAAGCATCAGAAAGCAGCTCCAACTCATTCCCTTCGCCACCAAATGATAAAAAGGTAAAACGGAATCGAGAGTCTAACAAACACCCCGTGTATAGAGGTGTGAGGATGCGGAATTGGGGGAAATGGGTTTCTGAAATCCGTGAGCCAAGGAAGAAATCGAGAATATGGCTAGGGACATTCCCCACACCGGAAATGGCAGCGAGAGCACATGACGTGGCAGCGTTGAGCATCAAAGGAAGCTCTGCCATTCTCAACTTCCCTCACCTCGCCACTTGTTTCCCTCGTCCTGCTTCTTTGGCCCCTCGTGATGTTCAAGCAGCTGCTGCTAAAGCTGCTCAAATGGACAACTTCGAATTGCCTTCTTCTTCATCTTCAACGATGGATTTGTCTGCTGCTTCTGAAGAATTGAGTGAGATCATAGAGCTGCCAAGGTTGGAAAGTGGTTATGAGGTGGGGAAGGAGTTTGTGCTCATGGACTCGCATGATGCGTCATGGATGTATCAACCACCAATGCCGTGGTTGCTGCAGGATGATGCTGGTTGCAGTGGTGATGAATTTGCAGTTCCGGGGAGTGTTGGGGTTGTCACTAGTTTCGAGAGTTTCATGTGGTCAAATTATTAA 1155 0.4554 MATETKSSTVKLKSSASDGSSKGKVDSSALKKKVDSSSKHPSDSKMKSVTTVTKSEVKSKTTSSSSKTETKTTSTTKVRERKVYSLPGQKHDPPEQKEPLRIFYESLSKQIPTSEMAEFWLMEHGMLSPERAKKAFEKKQRKQKELRTGTPVKPSKPVTKTETSQKQQASRNGEAQNSEASESSSNSFPSPPNDKKVKRNRESNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSSAILNFPHLATCFPRPASLAPRDVQAAAAKAAQMDNFELPSSSSSTMDLSAASEELSEIIELPRLESGYEVGKEFVLMDSHDASWMYQPPMPWLLQDDAGCSGDEFAVPGSVGVVTSFESFMWSNY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi336g00014 384 MobiDBLite consensus disorder prediction 1 101 - -
Sebi336g00014 384 ProSiteProfiles AP2/ERF domain profile. 208 265 IPR001471 GO:0003700|GO:0006355
Sebi336g00014 384 MobiDBLite consensus disorder prediction 73 99 - -
Sebi336g00014 384 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 180 325 - -
Sebi336g00014 384 MobiDBLite consensus disorder prediction 43 72 - -
Sebi336g00014 384 FunFam Ethylene-responsive transcription factor 2 207 266 - -
Sebi336g00014 384 MobiDBLite consensus disorder prediction 154 193 - -
Sebi336g00014 384 MobiDBLite consensus disorder prediction 1 24 - -
Sebi336g00014 384 CDD AP2 209 267 IPR001471 GO:0003700|GO:0006355
Sebi336g00014 384 SMART rav1_2 208 271 IPR001471 GO:0003700|GO:0006355
Sebi336g00014 384 PRINTS Ethylene responsive element binding protein signature 209 220 IPR001471 GO:0003700|GO:0006355
Sebi336g00014 384 PRINTS Ethylene responsive element binding protein signature 231 247 IPR001471 GO:0003700|GO:0006355
Sebi336g00014 384 Pfam AP2 domain 207 257 IPR001471 GO:0003700|GO:0006355
Sebi336g00014 384 MobiDBLite consensus disorder prediction 131 149 - -
Sebi336g00014 384 SUPERFAMILY DNA-binding domain 208 266 IPR016177 GO:0003677
Sebi336g00014 384 MobiDBLite consensus disorder prediction 194 209 - -
Sebi336g00014 384 MobiDBLite consensus disorder prediction 131 209 - -
Sebi336g00014 384 Gene3D AP2/ERF domain 208 266 IPR036955 GO:0003700|GO:0006355
Sebi336g00014 384 MobiDBLite consensus disorder prediction 25 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi336g00014 Sebi-Chr336 590036 600242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi336g00014 177 358 AP2-EREBP Transcription Factor Family AT5G11590 57.843 1.54e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi336g00014 AP2 5.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi336g00014 K09286 - gmx:100305349 241.891