Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi336g00007 ATGGCTTCAGTTTCTATGGAGAGGGTCATCGGAGGAAAATATAAAATCGGTCGGAAAATTGGGAGTGGATCATTCGGTGAAATTCATATTGGGGCGCATGTAGAAACCTCTGAGATTGTGGCCATCAAGATGGAGAACAGGAAAACCCAACATCCGCAGCTACTGTATGAGGCCAAGATATATAATATTCTTCAAGGAGGAAGTGGTATTCCAAGAATAAAATGGTGTGGTACTGAACGAGACAACAACGTTCTAGTTATTGAACTTTTGGGACCAAGTCTTGAAGACCTCCTTTTCTTCTGTGGTGGGAAGTTTTCACTAAAAACAGTTTTGATGTTGGCTGATCAGATGCTTACGAGGATAGAATATTTACATTCCAAGGGATTCCTGCATAGAGATATCAAACCGGATAACTTCCTTATGGGTCTTGGGAGGAAAGCAAATCAGGTTTTTATGATTGATTTTGGACTTGCAAAAGGATATAGGGACCCTTATACAAATAAACATATCCCTTACAGAGAGAACAAAAACTTAACAGGGACTGCACGTTATGCAAGTTGCAATTCTCACAAAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCCCTTGGTTATGTTCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGCAAGCTCCCACCAGAATGCAAAAATATGACAAAATTCGCAAAATGAAGTTATCAACTCCCACTGAGGTACTTTGCAAGTCATGTCCTGGGGAGTTTGCTTCTTACTTTCATTATTGCCACTCTTTGAAATTTGATCAAAGGCCAGAATATGGATTTTTGAAGCGCCTGTTTCGCAATTTGTTCACATGTCAAGGATATGATTCTGACTCTTTATTTGACTGGACAATTTTAAAATCTCAGCAGATGCAACAGGCAAAGACACAAACTCAATCAACTGCTCCAGTTGCTGTGCCTAGCACTCTTGAACCAGTGGATATGGATAAGCATAAAGAAGCCAATGATTCCACACCAAATGCCGTGGCAAAACCATCTTCAATCTATTGTGATCGTCCACGTGTTTGTGTGAAGATTAGGGCACCTAATGTTCAGAATCTCAATGGCAAGGTTCAGACAGAGAAACATACTCTGAATGTTGGTTCATCTATTTCCTCTGCCATGCCCAGAGCCTCTACAGATAATATCTCACAACCCAGCAGGCCTGAAGAAACCTCAAACCCGGGTCACCTATTAGGGAGTAAATCCAGTGCTTCGGGCAGCTTTGTTCCTTCACTACGCCGAGTTTCATCAACCAAAGAGAGTCACTCGAGTTCTCTTTTAACTGTTGCAAATGTTATGGCACTTCACCAAAGTAGCAGTAGACTGTCATCACAAGGAAGATGCCATAACAATCTCCCTGAACATGACACCTCTATCAAAGGGTTCTCGGCTGTAGAACTTAAATGTGAGATGAAATGTGACCACTGTGGGAGATGGGGGTGCTCTGTGTTTATGAAGAATCAAACATGCATGGATGAGGGGATGCCACAATCCTTCTTTTGGTACTGTCATCAGTTAATCAACTTGAGTTCTTCTTCGAAGTATTTGCTACAGAAATTTGGTTACAATTTCCTATGTGCAGTTCAATTTCACAAAAGAGCAAACATTTTGGAAATTGGAGCTCATGCTATATGGGTGTATGTGTTCTATTCCGAGGGCGAGCACTCCGGTACTCATCCTAGTGGTACCCATCCGCAGAGCAGTGACTGGGTTTCAGGCAGTGTGCAGTTGGGGACAAAAGCGGATGGTGGGGGTGAACATCACGTCATGGTGGAAGGAGAGCGAGCGTGGTGGTTTAGGGACGTGGACAGCGTGTAG 1857 0.4281 MASVSMERVIGGKYKIGRKIGSGSFGEIHIGAHVETSEIVAIKMENRKTQHPQLLYEAKIYNILQGGSGIPRIKWCGTERDNNVLVIELLGPSLEDLLFFCGGKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGRKANQVFMIDFGLAKGYRDPYTNKHIPYRENKNLTGTARYASCNSHKGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAPTRMQKYDKIRKMKLSTPTEVLCKSCPGEFASYFHYCHSLKFDQRPEYGFLKRLFRNLFTCQGYDSDSLFDWTILKSQQMQQAKTQTQSTAPVAVPSTLEPVDMDKHKEANDSTPNAVAKPSSIYCDRPRVCVKIRAPNVQNLNGKVQTEKHTLNVGSSISSAMPRASTDNISQPSRPEETSNPGHLLGSKSSASGSFVPSLRRVSSTKESHSSSLLTVANVMALHQSSSRLSSQGRCHNNLPEHDTSIKGFSAVELKCEMKCDHCGRWGCSVFMKNQTCMDEGMPQSFFWYCHQLINLSSSSKYLLQKFGYNFLCAVQFHKRANILEIGAHAIWVYVFYSEGEHSGTHPSGTHPQSSDWVSGSVQLGTKADGGGEHHVMVEGERAWWFRDVDSV 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi336g00007 618 FunFam CK1 family protein kinase 6 337 - -
Sebi336g00007 618 Gene3D Transferase(Phosphotransferase) domain 1 2 345 - -
Sebi336g00007 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Sebi336g00007 618 ProSiteProfiles Protein kinase domain profile. 14 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi336g00007 618 MobiDBLite consensus disorder prediction 367 428 - -
Sebi336g00007 618 SUPERFAMILY Protein kinase-like (PK-like) 10 295 IPR011009 -
Sebi336g00007 618 SMART serkin_6 14 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi336g00007 618 PANTHER CASEIN KINASE-RELATED 10 337 - -
Sebi336g00007 618 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Sebi336g00007 618 Pfam Protein kinase domain 14 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi336g00007 Sebi-Chr336 383036 392771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi336g00007 12 242 CBL-interacting serine-threonine protein kinases AT4G24400 28.870 3.04e-15 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Sebi336g00007 Pkinase 3.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi336g00007 K08960 - gmx:100782913 631.328