Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi335g00011 ATGGTTAATTTATGCAGTGTTGAAGCCATAAATGGTGTGAAGCCTGTACTGTTAATGATAGTGGTCCAGTCTCTATATGCAGTGGTAAATATCTTGTTAAAGGTGGTAGCAGATGATGGAATGAGCTTAAGTGTTCTTATTACCTACCGTTTTGTCTTTTCCTCTGCCTTCATTGTTCCCTTGGCTCTCCTCTTTGAAAGTGTTGAAAATGGTGTGAAGCCTGTACTGTTAATGGTAGTGGTCCAGTCTCTATATGCAGTGGTTAATATCTTGTTAAAGGTGGTAGCAGATGATGGAATGAGTTTAAGTGTTCTTAATGCCTACCGTCATGTCTTTTCCTCTGCCTTCATTGTTCCCTTGACTCTCCTCTTTGAAAGGAAAAGCATGCAATACCTTACTGGGAAAGTTCTATTCCAAGCTTTTCTTTGTGGATTATTTGGGGGATCCTTACTACAAAACATCTATGTCAAAGCTTTGGCCTTGATATCTGCAACATATACAACAACCATATTCAACCTCGTCCCAGCTGTTACCTACATCATGGTTGTTTCTTTTAGACTGGAGAAACCAAATCTTGGAACACATGCTGGGAAGGCCAAGTTGCTGGGCACTATAACAGCAATTGGTGGTGCCATGATCCTCACTTTATATGAAGGCAGAAGGATATTCAATTGGTCAATACACGTTGACTTTTTTCAAAATGCAGCACCATCACCAGAGAGTGCCACCTCTGGTTCTCACTTGTGGGGCTTCATGCTAGCTATAGTCGCTCCTGTGATTTACTCATTGTGGTTGATAATCCAGACAAAGATGAGTGAGAAGTTTCCGTGGCACTATTCAATTGCGGCTTTAACCTCTATCATGGCCGCAATCCAATCCATTATATTTGCTCTTTGTACAGAAAGAGATTGGAGCCAATGGAAACTTGACTGGAACTTGAGGCTTTTAGCAGCAGCTTCCTCGGGTATCTTGGTCACTGGGGTGTGTTATCCCCTAATAGCATGGTGTGTGCACTTGAAGGGACCTCTGTTTGTGTCTGCTTTTAGTCCTCTAATGCTTGTGCTAGTGGCCCTAGGTGGATCCTTAGTACTAGATGAGTATATTACCATTGGAAGTCTGTTAGGAGCAGTGTTGATTGTGTGCGGATTGTACATGTTGTTGTGGGGGGAAAGCAAAGAAACAAGGAAGGCAAAGAGTGATTTAGTGTCCGCAAATGTCTCTGTTGAATGTGATTCAATCCAAATTTGCAACCAAAAGGAGCATGACAAGAAGATCAAAGCAAGTGTTGCCCCTTACACATTTTCAAGTGTCAACAATTCTTTAGGCGAAGTTCAACAATTAAAGATTTGA 1350 0.417 MVNLCSVEAINGVKPVLLMIVVQSLYAVVNILLKVVADDGMSLSVLITYRFVFSSAFIVPLALLFESVENGVKPVLLMVVVQSLYAVVNILLKVVADDGMSLSVLNAYRHVFSSAFIVPLTLLFERKSMQYLTGKVLFQAFLCGLFGGSLLQNIYVKALALISATYTTTIFNLVPAVTYIMVVSFRLEKPNLGTHAGKAKLLGTITAIGGAMILTLYEGRRIFNWSIHVDFFQNAAPSPESATSGSHLWGFMLAIVAPVIYSLWLIIQTKMSEKFPWHYSIAALTSIMAAIQSIIFALCTERDWSQWKLDWNLRLLAAASSGILVTGVCYPLIAWCVHLKGPLFVSAFSPLMLVLVALGGSLVLDEYITIGSLLGAVLIVCGLYMLLWGESKETRKAKSDLVSANVSVECDSIQICNQKEHDKKIKASVAPYTFSSVNNSLGEVQQLKI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi335g00011 449 PANTHER WAT1-RELATED PROTEIN 14 63 IPR030184 GO:0016020|GO:0022857
Sebi335g00011 449 SUPERFAMILY Multidrug resistance efflux transporter EmrE 108 219 - -
Sebi335g00011 449 SUPERFAMILY Multidrug resistance efflux transporter EmrE 293 392 - -
Sebi335g00011 449 Pfam EamA-like transporter family 74 214 IPR000620 GO:0016020
Sebi335g00011 449 Pfam EamA-like transporter family 248 387 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi335g00011 Sebi-Chr335 333373 367594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi335g00011 13 66 Nodulin-like Gene Family AT1G25270 44.444 3.09e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi335g00011 - - mtr:25493318 514.612