Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi335g00003 ATGAGTAAAGAATATCCAAGCCAATACTCAAGCACAGCATTGATGACCTTAATGGGGGCAATACAAGCCACTGCCTTTGCCCTTTGTGTTGAGAAAGATTGGAATCAATGGAAGTTGGATTGGAATATTAGGCTTCTAACTGCAGCTTATTCAGGAATTGTGGCCTCCGGAGCTATGGTTATTATCATTGCATGGTGTGTACGGATGAGAGGGCCAATGTTTGCATCTGTTTTCAACCCTCTCATGCTTGTGCTTGTGGCTATTGCTGGTTCCTTGATGTTAGATGAGAACTTATATGTGGGAAGTGTAATTGGAGCCGGGCTAATTGTGTGTGGCTTGTACATGGTGCTTTGGGGCAAGAGCAAAGAAATGAAAAAGGTGAATCACTTGGTGTCTTCAGAAATCAGCCAAGAACATAAAGCAAGTGAGGTTGTTGTCATGTCCCCCATGACAAATAATGACAATGGTGACTGCTGTGACAAATACACACACCAGCCAAGGTTTCATGACGATTCATCGAATGCATTATAA 531 0.4275 MSKEYPSQYSSTALMTLMGAIQATAFALCVEKDWNQWKLDWNIRLLTAAYSGIVASGAMVIIIAWCVRMRGPMFASVFNPLMLVLVAIAGSLMLDENLYVGSVIGAGLIVCGLYMVLWGKSKEMKKVNHLVSSEISQEHKASEVVVMSPMTNNDNGDCCDKYTHQPRFHDDSSNAL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi335g00003 176 Pfam EamA-like transporter family 4 117 IPR000620 GO:0016020
Sebi335g00003 176 SUPERFAMILY Multidrug resistance efflux transporter EmrE 35 122 - -
Sebi335g00003 176 PANTHER WAT1-RELATED PROTEIN 1 133 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi335g00003 Sebi-Chr335 39922 40701 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi335g00003 1 143 Nodulin-like Gene Family AT1G68170 48.252 1.44e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi335g00003 - - gmx:100813812 238.424