Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi334g00025 ATGCGAAGCTCAAACACTCAAAACCCTAGTTCTTCCACAAGCAACAACAGGGAAATGGCTCCTAAGCAGCCAAATACGGGTCTTTTTGTTGGATTGAACAAGGGTCACGTTGTCACCAAGAAGGAATTGGCTCCACGACCCTCCGATCGCAAGGGGAAAACAAGCAAACGTGTGCACTTTGTAAGGAACCTCATCCGGGAGGTTGCTGGTTTTGCTCCTTATGAAAAGCGTATAACTGAGTTGCTGAAGGTTGGAAAAGATAAGAGAGCACTGAAAGTTGCCAAGAGAAAGCTTGGAACCCATAAACGTGCAAAGAAGAAGCGTGAGGAGATGTCCAATGTTCTCCGCAAGATGAGGGCTGGTGGAGCCGGTGATAAGAAGAAGTAA 387 0.4703 MRSSNTQNPSSSTSNNREMAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi334g00025 128 Pfam Ribosomal protein L36e 26 119 IPR000509 GO:0003735|GO:0005840|GO:0006412
Sebi334g00025 128 MobiDBLite consensus disorder prediction 97 128 - -
Sebi334g00025 128 MobiDBLite consensus disorder prediction 1 22 - -
Sebi334g00025 128 ProSitePatterns Ribosomal protein L36e signature. 73 83 IPR000509 GO:0003735|GO:0005840|GO:0006412
Sebi334g00025 128 Gene3D 60S ribosomal protein L36 17 126 IPR038097 -
Sebi334g00025 128 FunFam 60S ribosomal protein L36 19 124 - -
Sebi334g00025 128 MobiDBLite consensus disorder prediction 105 128 - -
Sebi334g00025 128 PANTHER 60S RIBOSOMAL PROTEIN L36 12 126 IPR000509 GO:0003735|GO:0005840|GO:0006412
Sebi334g00025 128 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi334g00025 Sebi-Chr334 668059 669463 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi334g00025 19 128 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 80.909 9.78e-59 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi334g00025 K02920 - zju:107414508 218.394