Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi334g00008 ATGAAAAGGAAGAGCCTTAATTCTTCTTCTTTTGATGACTCCTCAAATCATTCCCATGACATACACGCTATTGTTTCTCCTTACTATTCTTCGTGGCAAAAATCCTATGATCCTGAATTTCTGAAGAAAATGTCCACAAAGGTTTTGGCGAAGACATGGGGAAAACCTAGTGTGTTTAGAAATGATAGATACCCCATGTTTGGTAATGGTTTGGTCATGGCTGAAGGCAGCATATGGGTTCATCACCGACATGTTATAGCCCCAACATTTTCTCCCCTTAACTTGAAGGGAATGGCAAGCATGATGGTTGATTCCACAAGGAAAATGATAGATAAGTGGGTTTCCCAAATATGTGGGTGTTCCATTGGGAAGTTGTTCACTATTAAGAAAACTCTAGAGGCCAAGAAACTTGGTGAAGAAATTGACAAGCTCTTGTTGTCCATCATAGAAGCCCGGATGAAATCAGATAAGAGACAACCTCAACAAGATTTGTTGGGTCATTTGTTGCAAGAAAATCATCATGATGATCAGGTTGATGGACAGGTGAAGAAGGCATTAAGCATGAGAGAATTGGTTGATGAGTGCAAGACCTTTTTCTTTGGTGGCTATGAGACCACAGCACTTTCAATCACATGGACTTTGATGCTTCTAGCTATGCATGAAGATTGGCAAAATCAATTGAGAGATGAAATAAAAGAAGTGGTTGGTAATGATGAACTTGATGTCAACTTGCTTGCTGAATTAAAGAAGATGAAATTGGTGATGAATGAAGCTCTTAGACTCTATCCACCATCACCAAATGTGCAAAGGCAAGCTAAAGAAGACATTCAAATTGATCATTTAGTAGTGCCTAAGGAAGTAACATTTGGATCGATGTTGTAG 882 0.3912 MKRKSLNSSSFDDSSNHSHDIHAIVSPYYSSWQKSYDPEFLKKMSTKVLAKTWGKPSVFRNDRYPMFGNGLVMAEGSIWVHHRHVIAPTFSPLNLKGMASMMVDSTRKMIDKWVSQICGCSIGKLFTIKKTLEAKKLGEEIDKLLLSIIEARMKSDKRQPQQDLLGHLLQENHHDDQVDGQVKKALSMRELVDECKTFFFGGYETTALSITWTLMLLAMHEDWQNQLRDEIKEVVGNDELDVNLLAELKKMKLVMNEALRLYPPSPNVQRQAKEDIQIDHLVVPKEVTFGSML 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi334g00008 293 PRINTS E-class P450 group I signature 210 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi334g00008 293 PRINTS E-class P450 group I signature 190 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi334g00008 293 Pfam Cytochrome P450 133 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi334g00008 293 SUPERFAMILY Cytochrome P450 36 288 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi334g00008 293 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 114 - -
Sebi334g00008 293 Gene3D Cytochrome P450 120 292 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi334g00008 293 Gene3D Cytochrome P450 11 119 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi334g00008 293 PRINTS P450 superfamily signature 253 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi334g00008 293 PRINTS P450 superfamily signature 201 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi334g00008 Sebi-Chr334 228079 230702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi334g00008 1 284 Cytochrome P450 AT5G52400 41.504 1.03e-88 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi334g00008 - - gmx:100785284 357.836