Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi333g00002 ATGGAGTATAATGTGGACTGTGTAAGCAATAGAGTTAGTGGATTAGAAGATAGTGTAGAATTCGCAGCAGAAGATGAATTTTCAAAAGGGACCAATTTTGAAGGGTTTTGTTTTGATAGTGAAAATGATTTTGTGAAAGTAGACCCTGCTGTGCTTAGTACTGATCTCATTAAGACATTTACTTTCTCGAATTTGGAAGTAGCATATGAGTTTTATAACTGGTATGGAAGGATTAAAGGGTTTTCTGCTAGAAGGGGAAAAGTTCGAAAGAATAGGGATCAAGAAATTGTAGAGAAGACTTTATTTTGTCACAGGGAAGGAAAAAGGACGAAAAAAGATGATAATGAAGAAGAGCCCATTGTGCGTGAACCAAGACCCGAGACAAGAACAGGATGTCGTGCTAAAATGAAGGTGCGTATTGATGTTGTTAGTGGGAGGTGGCGCGTTTCTAAGTTTCATGAAGAACACAACCACAAGCTGTTGGGAGCAATACACACTGGAATGTTGCCTGCTCATAGGAAAATGACCGATGCTGACATTATGCAAATGAATAGTTTGTGCAATACAAGGATGTTGCAGTCATCTGATGTTAAGGGTGCATTTCAATACCTTCGTGACATGGCATCTTCTAGTGGACCTATAATAAACCATCACAACCAAACTACTATCTTTGCTACTGGTGTTATTGCTGATGAAACTGAGGAGACCTATGTGTGGTTACTTGAACAACTGATGGTTGCTATGAAAGGCAAGGCACCTGTCTCTGTTATTACTGATGGAGATTTGACAATGAGGAATGCAATCAAAGAGTATTTCCTAATGCACATCACAGGTTATGTGCATGGCATCTGTTACGTAATGCTAATAGCAATGTGGGGTGAAATGGTTGTTCAGTGTGGGCTAGGGGAAAATATTGGGTGCAAGAATTATGAGATTCCTAATTGCATTGTTCTGGAAAGATGGACTATGTCGGTGAAGGAAAAATTATATGAGTTATGTGACCAACAAAGTTCAATGTTGGGCTCGGTATTCATGGCTCATTGTGGTTGTTTGGATTCTTTATCTAGAAAGGTGAATAGGCTGGCAGCTAGATCAACAGTAAGATTTAATGCCATTAGAGACTTGCTTACTGATGAGCTACATAAGCTTGAAATAGCAGATCAAGATGGAAATGGAGGGAATGAACCTTGCAATGATGCCTCACATGGACAATTTAGGGATCCTGTACGAGTTGGGAGTAAGGGTTGTGCTGCCAGCTCCACAATGAATGGTTCTCAAAGAATGCGACGACAAAAGAGGGATCAAATCAGCACTATGATGACCACAATGTCTTTGGGGCGGATACATTCACTTTTGATCCGAGCATGGGGTTTGTTCCGACTTTGTGACTATCTGGGAAAGCTTATGGTGGACATTTATCAAGGTGATCCTATTTATTGGCTGTTGTAG 1449 0.403 MEYNVDCVSNRVSGLEDSVEFAAEDEFSKGTNFEGFCFDSENDFVKVDPAVLSTDLIKTFTFSNLEVAYEFYNWYGRIKGFSARRGKVRKNRDQEIVEKTLFCHREGKRTKKDDNEEEPIVREPRPETRTGCRAKMKVRIDVVSGRWRVSKFHEEHNHKLLGAIHTGMLPAHRKMTDADIMQMNSLCNTRMLQSSDVKGAFQYLRDMASSSGPIINHHNQTTIFATGVIADETEETYVWLLEQLMVAMKGKAPVSVITDGDLTMRNAIKEYFLMHITGYVHGICYVMLIAMWGEMVVQCGLGENIGCKNYEIPNCIVLERWTMSVKEKLYELCDQQSSMLGSVFMAHCGCLDSLSRKVNRLAARSTVRFNAIRDLLTDELHKLEIADQDGNGGNEPCNDASHGQFRDPVRVGSKGCAASSTMNGSQRMRRQKRDQISTMMTTMSLGRIHSLLIRAWGLFRLCDYLGKLMVDIYQGDPIYWLL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi333g00002 482 MobiDBLite consensus disorder prediction 108 129 - -
Sebi333g00002 482 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 304 IPR031052 GO:0006355
Sebi333g00002 482 Pfam MULE transposase domain 214 285 IPR018289 -
Sebi333g00002 482 Pfam FAR1 DNA-binding domain 70 161 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi333g00002 Sebi-Chr333 22442 25028 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi333g00002 FAR1 1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi333g00002 - - tpra:123896136 196.052