Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi332g00060 ATGAACAAAGGTGCTTGGTCTAAGCAAGAAGATCAAAAGCTCATTGATTACATTCGAGTTCATGTGAAGGATGTTGGCGCTCCATTCCCAAGGCTGCTGGTGGTCACTGATAGCTGGAAGGTGCCAGGACGTCAGACAAACGAGGTGAAGAACTATTGGAATTCTCACATTCGTAGAAAGCTAATAAAGATGGGAATTGATCCAAATAACCATAAGCTACACCAAACCTTATTTCCTCCTCTCCTCCTGAGG 252 0.4405 MNKGAWSKQEDQKLIDYIRVHVKDVGAPFPRLLVVTDSWKVPGRQTNEVKNYWNSHIRRKLIKMGIDPNNHKLHQTLFPPLLLR 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi332g00060 84 Gene3D - 1 63 - -
Sebi332g00060 84 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Sebi332g00060 84 CDD SANT 5 57 IPR001005 -
Sebi332g00060 84 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Sebi332g00060 84 SUPERFAMILY Homeodomain-like 2 67 IPR009057 -
Sebi332g00060 84 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 40 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi332g00060 Sebi-Chr332 1097111 1098258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi332g00060 1 71 MYB Transcription Factor Family AT1G35515 34.783 1.43e-16 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi332g00060 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi332g00060 K09422 - gmx:100793444 93.9745