Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi332g00007 ATGTCCAACCCCATTATGGCGAAGGCACTCACACTTCTCCATGTTCTCCTTCTTGCCTCAATCCCTGTAAACTCTACTCACGAAGAGTGGATTTTTGTTGGGTTCCATGGAGCCAGCAACATAAGCATAAACGGCGATGCAGTGATTGAGGACAATGGCATACTTACCCTTACAAACGACACTGAAAAAGTTCTTGGGCACGCGTTTTATTCAAACCCAATCCACTTCAAGAACAACTCCACTGATGGCAAAGTTTTCTCCTTTTCCACAGCTTTTGCTTTTGCAATAACCACCAAGCTTCCCAAACAAGGTGGTCATGGTTTAGCCTTCACCATTTCTCCCTCTAAAGAGCTTAAAGGTGCTTATCCTGGGCAGTACTTGGGGCTTCTCAACCCACACGATGTGGGGAAATTCTCTACCCACTTGTTTGCAGTGGAGTTTGACACTGTTGAAGACTATGCATTTGGTGAGATCAATGGCAACCACGTTGGTATCAACTTGAACAACATGAAATCTAACAGATCTGTTACTGTTGTTGATGGGTCAACAAAGCAAAACCTCAATTTGCAGAGTGGCAAGGTGATTCAAGCATGGGTAGATTACAATTCCTCTAGCAACCAATTGGATGTTAGGCTTTCCACAACCTCTTCAAAACCCAGTTCCCCAATCTTGTCCTACCAAGTTGATCTCTCACCAATTCTTAAAGACGTTATGTATGTGGGGTTTTCTGCTTCAACAGGGTTGCTAGCGAGCTTGCACTATATCCTTGGTTGGAGCTTCAAAATGAATGGAGAAGCCAAATCTCTGAACTTGGAAACATTACCATCACTCCCTGGGTCTAAGAACATAAAAAAGGCCTTAATACTTGGAATCACTGTTTCTGCTTCTATTCTAACAATAATCTTGGCAATTGGGTTAGCAACTTACCTAATAAGAAAGATGAAGAAAGGTGATGATATTGAAGCTTGGGAGCATAATATTGGCCCCCACAGGTTCCCATATGAGGAGCTGAAACAAGCAACAAAAGGGTTCAAGGAGAAAGAACTAATTGGGTTTGGTGGGTTTGGTCGAGTTTACAAAGGGATTCTACCAAACACCAACACCCAAGTCGCAGTGAAGCGAATCTCCCAGGACTCAAAACAGGGGATGCAACAATTCATGTCAGAGATTGCAACCATTGGTAGGCTCCGTCACAGGAACCTAGTTCAATTACTAGGTTGGTGTCGGAAACGCTATGATCTACTACTTGTGTACGATTTCATGCCCAATGGAAGCTTGGACAAGTACCTATTCGACCAACCCAGAGCAATTTTAAGCTGGGAACAGAGGTTCAAGATCATAAAGGGCGTAGCTTTGGGTCTGGTTTACTTGCATGAGGAATGGGAACAAACGGTGATTCACAGGGACATAAAAGCAGGAAACGTTTTGTTAGATTCAGAGATGAATGGAAGGTTAGCACCAGAGTTAACTCGAACGGGGAAACCAACTACTAGTTCTGATGTGTTTGCATTTGGTGCTCTGTTGCTTGAAGTGGCGTGTGGGAGAAGACCCGTTGAGCCTAAAGCGTTGCCGGAGGAACTCATATTGGTGGATTGGGTTCGGGATATGTGGCGGGTCGGTGCTGTTTTGGAGGTTATGGACCCCAAATTGGGTGGGGTGTTTGATAAGGAACAGGCTTTGCTTGTTCTGAAATTGGGGTTGTTGTGTTCAAGTGACAACCCTACTGAACGTCCTAGTATGAGGCAGGTGGTGATGTACTTGGAAGGGGAGGCGGCAGCGCCCCCGGTGGGTGATGGTGGTGAAGTTGGGGACTTTGGCCGGTCAACGTCGTCGTATTTTGATGCATGCGGATCCTTTCCACTTGGTTTTTCAATGGGAGTGGGTGGTGTTGAGGCTTCCTCACTTTCACTTTCTAGTGAGCCAGAGAGGAGGTAG 1935 0.4548 MSNPIMAKALTLLHVLLLASIPVNSTHEEWIFVGFHGASNISINGDAVIEDNGILTLTNDTEKVLGHAFYSNPIHFKNNSTDGKVFSFSTAFAFAITTKLPKQGGHGLAFTISPSKELKGAYPGQYLGLLNPHDVGKFSTHLFAVEFDTVEDYAFGEINGNHVGINLNNMKSNRSVTVVDGSTKQNLNLQSGKVIQAWVDYNSSSNQLDVRLSTTSSKPSSPILSYQVDLSPILKDVMYVGFSASTGLLASLHYILGWSFKMNGEAKSLNLETLPSLPGSKNIKKALILGITVSASILTIILAIGLATYLIRKMKKGDDIEAWEHNIGPHRFPYEELKQATKGFKEKELIGFGGFGRVYKGILPNTNTQVAVKRISQDSKQGMQQFMSEIATIGRLRHRNLVQLLGWCRKRYDLLLVYDFMPNGSLDKYLFDQPRAILSWEQRFKIIKGVALGLVYLHEEWEQTVIHRDIKAGNVLLDSEMNGRLAPELTRTGKPTTSSDVFAFGALLLEVACGRRPVEPKALPEELILVDWVRDMWRVGAVLEVMDPKLGGVFDKEQALLVLKLGLLCSSDNPTERPSMRQVVMYLEGEAAAPPVGDGGEVGDFGRSTSSYFDACGSFPLGFSMGVGGVEASSLSLSSEPERR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi332g00007 644 Pfam Protein tyrosine and serine/threonine kinase 346 481 IPR001245 GO:0004672|GO:0006468
Sebi332g00007 644 SUPERFAMILY Protein kinase-like (PK-like) 326 589 IPR011009 -
Sebi332g00007 644 CDD lectin_legume_LecRK_Arcelin_ConA 29 264 IPR001220 GO:0030246
Sebi332g00007 644 ProSiteProfiles Protein kinase domain profile. 344 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi332g00007 644 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 278 IPR013320 -
Sebi332g00007 644 Gene3D Transferase(Phosphotransferase) domain 1 485 597 - -
Sebi332g00007 644 Gene3D Transferase(Phosphotransferase) domain 1 421 484 - -
Sebi332g00007 644 FunFam L-type lectin-domain containing receptor kinase S.1 329 420 - -
Sebi332g00007 644 Gene3D - 19 275 - -
Sebi332g00007 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Sebi332g00007 644 SMART serkin_6 344 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi332g00007 644 Pfam Legume lectin domain 29 274 IPR001220 GO:0030246
Sebi332g00007 644 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Sebi332g00007 644 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Sebi332g00007 644 PANTHER - 23 486 - -
Sebi332g00007 644 FunFam L-type lectin-domain containing receptor kinase S.4 26 268 - -
Sebi332g00007 644 FunFam Os07g0541700 protein 421 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi332g00007 Sebi-Chr332 107090 109380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi332g00007 23 596 Receptor kinase-like Gene Family AT3G55550 56.393 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi332g00007 Lectin_legB 1.3e-75 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi332g00007 - - qsa:O6P43_014345 806.208