Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi331g00068 ATGAACTCTTTCAATTTGCAGCAGCAAGTTTTGTGTCATGAAACTGAAAGCCACTATCCCTACCCTTCTTTATCCAACACTCTTGTTGAGGCTTCCACCACCACCAATTTGGAAAGATCTCATCTTTATGTCCAAAACAACCCTTCAACTACCATTCTTGACAAGTTCATGAGTGAGACAGCATCTTTTCACAGCTTTGGCACTAACAGCAGCCCCAAAGATGCTGCAGAAAATGCTCTATCCAGCCACATTTTGCCTTTTATGAACTCAACTACTGTGGAACCTGTCAGCAACATGAAACAAGGCTCTGTTTTGGGGTCCTTCAAAAGGAACCATAACTGGAAACCAGGGACTCACAAGAAGGTTAGAAGCTCTGCTGAGACTGCAGGTCATATAGAGGCAGAGAGAAAAAGAAGACAGAAAATGACTCAGAACTTCATAGCACTTTCAGCCATCATTCCTGGGTTGAAAAAGACAGACAAGTCTTATATACTTCAAGAAGCAATCAAATATGTGAATCAACTTCAAGAGCGTGTAAGAGAACTAGAAACAGAGAACGAAAAGATAAATGCACATTCAGTAATGTTGAGCAAGAAACTCATCAGGCTCCCCATGAATGAAGACTCAACCACCACAAGTGAAACAAACTTCGTTGGTGACACTAATAGATTTTTTCTTGAAGCACTGCCTGAGGTCACAGCAAGAGTCTCAGAGAAGAATGTGCTCATTGCAATCAAAATGGATGAGGAGTATAACATGGCACCAGATGATTTGGTGAAAAACTTGAGGAATGAGTTGCTGAAGTCACATGATGTTCAACAATGA 825 0.4109 MNSFNLQQQVLCHETESHYPYPSLSNTLVEASTTTNLERSHLYVQNNPSTTILDKFMSETASFHSFGTNSSPKDAAENALSSHILPFMNSTTVEPVSNMKQGSVLGSFKRNHNWKPGTHKKVRSSAETAGHIEAERKRRQKMTQNFIALSAIIPGLKKTDKSYILQEAIKYVNQLQERVRELETENEKINAHSVMLSKKLIRLPMNEDSTTTSETNFVGDTNRFFLEALPEVTARVSEKNVLIAIKMDEEYNMAPDDLVKNLRNELLKSHDVQQ 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi331g00068 274 Coils Coil 165 192 - -
Sebi331g00068 274 PANTHER BHLH TRANSCRIPTION FACTOR 14 245 - -
Sebi331g00068 274 SMART finulus 132 181 IPR011598 GO:0046983
Sebi331g00068 274 MobiDBLite consensus disorder prediction 108 130 - -
Sebi331g00068 274 Pfam Helix-loop-helix DNA-binding domain 131 176 IPR011598 GO:0046983
Sebi331g00068 274 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Sebi331g00068 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 197 IPR036638 GO:0046983
Sebi331g00068 274 Gene3D - 128 204 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi331g00068 Sebi-Chr331 932431 937227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi331g00068 58 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 35.263 4.59e-23 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi331g00068 HLH 6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi331g00068 - - vvo:131617999 173.711