Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi331g00067 ATGAACTCTCTGGATGAAGAAAATTTCCTCACAGAAATGGTGCAGCAGCAACAACCAAGTTTCCCTTTTGAGAGTGGTTACCACTCTTCTTCCACCATGCAATGTAACAAAAATGCTTTCACTATCATTGATGGTGGAACCACTACCTTATCCTATGATGAGGGGCAGGGGAAAATGCTCAATAATGATATCTCTAACTCTAACTCTATCATCTCTCATCAAGATGCTGCTTCAAACAATCCTGTACCAAATCCAAACACATTCTTTTTGTGCAAAGAAACATCCCTGAATGACTATATCACTCAACCAGAGGTGAAGCAACAGAACAATAAGAAGTGTAGAAGCTCATCTGAGGTAAATGATCACATAATGGCTGAGAGAAAAAGGAGACAACAACTCACTGAGAGGTTCATAGCACTTTCTGCCACCATACCAGGATTGAAGAAGACAGATAAGGCCCATATACTCCGAGAAGCTATCAATTATATGAAACAACTACAAGAGAGGGTAAAAGAGCTAGAGAATCAAAACCAAAGGAAAACAACTGAATCTACAGTGATATTCATCAAGAAATCCCAGGTCTGCTCAAAAGAGGAAATCACTTCTTCTAATTCTTCATGTGAAACGAACTCTGATAGTGTGGACAGATTCAAGAAAGCATTGCCTCAGGTTGAAGCAAGAGTCTTAGAGAAAGAGAAAGAAGTTCTCATTGGAATCCACTGTGAGAAACAAAAGGACTTTGTGCTCAGAATAATGACATTGCTTCAAAATCTTCATCTCTCTCTTGCTAGTAGTAGCGTATTGCCATTTGGGCCCTCCACTCTAAAAGTTACAATTATTGCTCGGATGGATGATGAATACTGCATGAGCGTGAATGATCTAGTAAAAAACCTGAGGCAAGATCTCTTGGAGTTACATGACACTCAAGAGTAA 933 0.3944 MNSLDEENFLTEMVQQQQPSFPFESGYHSSSTMQCNKNAFTIIDGGTTTLSYDEGQGKMLNNDISNSNSIISHQDAASNNPVPNPNTFFLCKETSLNDYITQPEVKQQNNKKCRSSSEVNDHIMAERKRRQQLTERFIALSATIPGLKKTDKAHILREAINYMKQLQERVKELENQNQRKTTESTVIFIKKSQVCSKEEITSSNSSCETNSDSVDRFKKALPQVEARVLEKEKEVLIGIHCEKQKDFVLRIMTLLQNLHLSLASSSVLPFGPSTLKVTIIARMDDEYCMSVNDLVKNLRQDLLELHDTQE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi331g00067 310 PANTHER BHLH TRANSCRIPTION FACTOR 8 303 - -
Sebi331g00067 310 Coils Coil 156 183 - -
Sebi331g00067 310 Gene3D - 114 187 IPR036638 GO:0046983
Sebi331g00067 310 Pfam Helix-loop-helix DNA-binding domain 122 167 IPR011598 GO:0046983
Sebi331g00067 310 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 184 IPR036638 GO:0046983
Sebi331g00067 310 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 117 166 IPR011598 GO:0046983
Sebi331g00067 310 SMART finulus 123 172 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi331g00067 Sebi-Chr331 880238 884074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi331g00067 66 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.081 2.51e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi331g00067 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi331g00067 - - gmx:100786209 310.457