Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi331g00049 ATGGCATCAACATTTGTCACCTTATCAAATCCTTTCCTACACAAAACCAGTGCCGTCTCATTCTCTAACCAGAGACTCCCAGTTTTGAAGAGGAACTCTTTGAAGATTAATGCAGTTGCCAAGAAATGGGAACCCACCAAGGTTGTGCCCCAGGCTGATAGAGTTCTCATTCGTCTGGAGGAGCTATCACAAAAAACAACTGGTGGAGTTCTGTTGCCCAAGTCAGCTGTTAAATTTGAGCGATATCTTGTGGGAGAAGTCCTAACTGTTGGCGCTGATGCTGGAGAACTAAAGGCTGGAACAAAGGTACTATTCACTGACATAAATGCTTATGAGGTGGATTTGGGGACTGATGCAAAACACTGCTTCTGTAAAGCAAGTGACTTATTGGCAACGGTTGAGTAG 405 0.442 MASTFVTLSNPFLHKTSAVSFSNQRLPVLKRNSLKINAVAKKWEPTKVVPQADRVLIRLEELSQKTTGGVLLPKSAVKFERYLVGEVLTVGADAGELKAGTKVLFTDINAYEVDLGTDAKHCFCKASDLLATVE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi331g00049 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Sebi331g00049 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Sebi331g00049 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Sebi331g00049 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Sebi331g00049 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 46 131 IPR020818 GO:0005524|GO:0006457|GO:0044183
Sebi331g00049 134 FunFam 10 kDa chaperonin 43 134 - -
Sebi331g00049 134 Pfam Chaperonin 10 Kd subunit 47 132 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi331g00049 Sebi-Chr331 709216 712802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi331g00049 15 134 Calmodulin-binding Proteins AT5G20720 28.788 1.62e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi331g00049 K04078 - gmx:100306026 230.72