Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi331g00014 ATGGGTAGCAGCCAGTTTAGATGTCAACAGCAATCTGCCATAGCCAGCTCAAGATTTAGAGTGCATTTGGGGTACAGTGTAGAGGGTTTTGTTTTGAAATCAAACATGCAAACGTTCAATATATTATATTTTCCTGAGATTGATTTGTCTCCTGTTTGTTATACAATGTCCATAGAGTTTGTTGTATTTAATCCCTATTCCATAGGGATAGTAGGAATTGAGTTGTTGAGTATCAAATGCAACCTTGTGCCTGCCAAATTGAGTTTCAACGATTTACCATATTCTACCGGCGAGACTACTTTGCAGAAGGAATTTTCAAATTTTGGCAAGATAGCTGAAGTTAAAATGATTAAAGATGTGAACACAAAAAGATCTAAGGGGTATGCTTTTATTCAATATACATGTCGAGATGATGCCATGCTTGCACTAGAAACCATGGATCAAAAGGATTTTTATGGTCGAACTATCTATGTAGAAGTTGCAAAATTGGGTTGGGATGATTTTGAAGCACCCCCAAGAACCTCAGGGCCCCCAAAGAAGTGGAATTTGCCAGAGCAAGGGGAAGTGGTAGATTGCTGGTACTGA 585 0.388 MGSSQFRCQQQSAIASSRFRVHLGYSVEGFVLKSNMQTFNILYFPEIDLSPVCYTMSIEFVVFNPYSIGIVGIELLSIKCNLVPAKLSFNDLPYSTGETTLQKEFSNFGKIAEVKMIKDVNTKRSKGYAFIQYTCRDDAMLALETMDQKDFYGRTIYVEVAKLGWDDFEAPPRTSGPPKKWNLPEQGEVVDCWY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi331g00014 194 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 91 156 IPR000504 GO:0003723
Sebi331g00014 194 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 86 183 - -
Sebi331g00014 194 SUPERFAMILY RNA-binding domain, RBD 88 164 IPR035979 GO:0003676
Sebi331g00014 194 Gene3D - 83 187 IPR012677 -
Sebi331g00014 194 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 85 163 IPR000504 GO:0003723
Sebi331g00014 194 SMART rrm1_1 86 159 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi331g00014 87 158 Eukaryotic Initiation Factors Gene Family AT1G49760 30.556 3.46e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi331g00014 - - gmx:100305971 202.216