Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi330g00066 ATGGTTTTACTTCGACAGTTAGAGCAGGGCATGCATCATGTTCGAAATTACTATAACTCAGAAATGCTAAGAAGTAGCTTTCCAAGGCCATTCATCTCACATACATACAAAAACAGTTTCTCAAAGCCAAGATCAAAGGCAGAGATCAAATTGCTTGCTGCTAAGAAACATAGTGAAGCAGAAAAGAGACGTAGAATGCGAATCAATGGTCAATATGACACCCTCCGCAGTATCCTCCCCAATATAATCAAAAAGGACAAGGCCTCAGTACTGGCAGAGACAATCAAGCAAGTGAAGGAGCTGAAGAAAATAGTATCAAAAGTGGAAGAAAATAATATTGGTAGCTCAAAGGAGGTTAAGTTTCCAAGTGGGGCAGACAAACTGAGTTTGGAAAAATGTAATGATGATGAGGGTCTAGTGAAGGCCATGTTGAGTTGTGAGGATAGGCCAGGATTGATGTCAGCCATAGCAGGGGCACTGGGGTCAGTGAAAGCCAAAGCAGTAAAGGCTGAGATGGTGATGGTAGGTGGAAGAACCAGGAGTGTGTTGTGGGTAAAAGGTCATGGGAATGAAGGTCTGGGGATGCTCAAGAGTACTTTAAGGGTTGCCATGATGCACAAGCCAGCCTATAAGATGCGTCGGTTTAATCAACAATAA 657 0.4292 MVLLRQLEQGMHHVRNYYNSEMLRSSFPRPFISHTYKNSFSKPRSKAEIKLLAAKKHSEAEKRRRMRINGQYDTLRSILPNIIKKDKASVLAETIKQVKELKKIVSKVEENNIGSSKEVKFPSGADKLSLEKCNDDEGLVKAMLSCEDRPGLMSAIAGALGSVKAKAVKAEMVMVGGRTRSVLWVKGHGNEGLGMLKSTLRVAMMHKPAYKMRRFNQQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi330g00066 218 Coils Coil 91 111 - -
Sebi330g00066 218 Gene3D - 52 112 IPR036638 GO:0046983
Sebi330g00066 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 52 101 IPR011598 GO:0046983
Sebi330g00066 218 SUPERFAMILY ACT-like 143 200 IPR045865 -
Sebi330g00066 218 PANTHER TRANSCRIPTION FACTOR BHLH30 30 207 IPR045847 GO:0003700|GO:0006355
Sebi330g00066 218 SMART finulus 58 107 IPR011598 GO:0046983
Sebi330g00066 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 110 IPR036638 GO:0046983
Sebi330g00066 218 Pfam Helix-loop-helix DNA-binding domain 55 101 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi330g00066 Sebi-Chr330 1037220 1038124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi330g00066 51 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 45.000 6.06e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi330g00066 HLH 2.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi330g00066 - - gmx:102667782 292.737