Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi330g00061 ATGGCTGAGAGCTTAGACAGTGCCACCTCTAACCTTCTCTGTTCCGAGACCAGTAGTACCTGCTTTGATGATGATTTGGAATGTAATGGTTTAGATGGGTCTGGAACCTCTCCTTCCTGGGACCACACAAACCTTAACTCTGATCAGTGTCCGAGTTTGGGCAGCCATGGATCGGAGTCCTTTACGTGTTTTATGGTACAGAGTGAGGAAACTGTGAGGGTTATGGTTAAGAGGGAGAGGGAGCATTTGCCAAGGGATGATTACCTCAAGAGGCTGCGTAGTGGGGACTTGGACTTGAGTGTTAGGAGGGAGGCTCTTGATTGGATTTGGAAGGCACATGCTTATTTTGATTTTGGACCATTGAGCTTTTGTCTATCTGTAAACTACCTGGATCGCTTCCTATCGGTTTTTGAATTACCTAGAGGGGTAAGTTGGACTGTGCAATTATTAGCTGTAGCTTGCTTGTCAATTGCTGCTAAAATGGAAGAGATTAAAGTGCCTCAATCTGTAGATTTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTCAGAAAATGGAACTACTAGTATTGAGCACATTGAGATGGAAAATGCAAGCTTTAACGCCTTGTTCCTTCATAGACTACTTCCTTGGTAAGATCACTTGTGAGAAACATCCAGTAAAGTCATCCATTTCAAGATCAGTGCAACTCATCCTTAGCATAATCAAGGGTATTGACTTCTTGGAATTCAGGCCTTCTGAAATTGCTGCAGCAGTGGCAATTTCTGTTTTAAGGGAACTGCAAGCAAAAGAGATTGATAAGACCATAACTGATTTCTTCATTGTAGAGAAGGAGAGAGTTGTAAAGTGTGTTGAACTGATAAGAGATTTGTCATTGATCAAGGCTGCTGCTAATTTAGGTAGTAAGTCTGCAGCATTTGTGCCCCAAAGCCCTATTGGGGTGCTAGATGCAGGATGCTTGAGTTCAAAGAGTGATGAATTAACAGTTGGGTCATGTCCAAATTCTTTACATAATAGTCCAAATACTAAGAGGAGCAAATCAGATGGACCTTCTAATGAGACTTCCAAGTCATGA 1086 0.419 MAESLDSATSNLLCSETSSTCFDDDLECNGLDGSGTSPSWDHTNLNSDQCPSLGSHGSESFTCFMVQSEETVRVMVKREREHLPRDDYLKRLRSGDLDLSVRREALDWIWKAHAYFDFGPLSFCLSVNYLDRFLSVFELPRGVSWTVQLLAVACLSIAAKMEEIKVPQSVDLQVGEPKFVFEAKTIQKMELLVLSTLRWKMQALTPCSFIDYFLGKITCEKHPVKSSISRSVQLILSIIKGIDFLEFRPSEIAAAVAISVLRELQAKEIDKTITDFFIVEKERVVKCVELIRDLSLIKAAANLGSKSAAFVPQSPIGVLDAGCLSSKSDELTVGSCPNSLHNSPNTKRSKSDGPSNETSKS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi330g00061 361 CDD CYCLIN_AtCycD-like_rpt1 101 199 - -
Sebi330g00061 361 FunFam D2/4-type cyclin 85 198 - -
Sebi330g00061 361 MobiDBLite consensus disorder prediction 332 361 - -
Sebi330g00061 361 Pfam Cyclin, C-terminal domain 205 298 IPR004367 -
Sebi330g00061 361 SMART cyclin_7 107 195 IPR013763 -
Sebi330g00061 361 Gene3D - 85 202 - -
Sebi330g00061 361 CDD CYCLIN_AtCycD-like_rpt2 205 291 - -
Sebi330g00061 361 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
Sebi330g00061 361 SMART Cyclin_C_2 204 314 IPR004367 -
Sebi330g00061 361 SUPERFAMILY Cyclin-like 61 201 IPR036915 -
Sebi330g00061 361 PANTHER CYCLINS 68 293 IPR039361 -
Sebi330g00061 361 FunFam D6-type cyclin 199 289 - -
Sebi330g00061 361 Pfam Cyclin, N-terminal domain 72 201 IPR006671 -
Sebi330g00061 361 Gene3D - 75 290 - -
Sebi330g00061 361 SUPERFAMILY Cyclin-like 186 296 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi330g00061 Sebi-Chr330 952278 954424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi330g00061 67 272 Core Cell Cycle Gene Families AT5G65420 62.981 8.24e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi330g00061 K18810 - gmx:100794010 535.028