Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi330g00038 ATGGCACGGATCATCCTCACCTCCCTTTTGCTCTTCCATTTTGTCCTCATTCCTTCCATGGCTTTTCCATCTGCTATTCCTCATGGCATTGGCCTTGGCTTTGGATATGGAGGGGGAATCGGGGATGAGAATGACCCACCACTGCCATTTCCACCTGATCAAGAGGAGCAGGCAGACGAACCACAACAGCCTATCAATGTTAATGCCAATCTCAAGGAAGGCTTCTACAGCGACAGTTGCCCAAATGCAGAAAGAATCGTCGCTGATGCACTTGCTGACATTGTTAGGACTAATCCAAACGCTATTGCCAACCTCATTCGCCTTCAATTCCATGACTGCTTCGTTGTTGGATGTGATGCGTCCATCTTGCTAGATTACTCACCAGCTGGTGACAAAGTGGAGAAAAGTTCAATGTTCAACGGTTTACTCCTCAAGGGTGCTGATCTGATTGATGATATCAAGAGAAAGCTTGAGGAAGAATGCCCTGGAGTAGTATCATGTGCTGATACAATGGCATTTGCTACCAATGAGGCCATGTCCTTGGCGGGTTTGCCACGTCAACCCCCACTTGGTGGTCGCAGAGATTCACTTTATTCTCTTGCAACTGTTGCAGAAGACAATAACCTTCCTCTGCCTAATTGGAATGCAGATCAAATGATAGAGCTATTCAATAGGAAAGGCTTCACCCCTGAGGAAATGGTGATCCTGCTTGGTGCACATTCAGTTGGTGCAGCTCACTGTGATGTTTTCATGGAGAGGGTATACAACTACAAGAACACTTTTAAACCAGACCCTGCACTTCCCTTACCTGTGGTTGATGAACTCAAACAGATATGTTCTAACCCTGGGACACCCCAGTTTAGAAACCCACCTGTGAACTTTGATGAGACACCAACTTTGCTTGATAACCTGTTTTTCAAGGACATGGTGGAGAAAAGCAAGACATTGCTCATAACAGATGCACATTTGATTGGTGATCCCAGGACTGCCCCTGTTGTCAAACAAATGGCAGATGATGTTGGCTTGTTCCAAAAGAGGTTTGCTGAATTGATGATTAGGTTGAGTGCTATGAATGTGCTGACAGGAAACGATGGAGAGGTGAGGAAGATTTGCAGGTCCACCAATTAA 1128 0.4574 MARIILTSLLLFHFVLIPSMAFPSAIPHGIGLGFGYGGGIGDENDPPLPFPPDQEEQADEPQQPINVNANLKEGFYSDSCPNAERIVADALADIVRTNPNAIANLIRLQFHDCFVVGCDASILLDYSPAGDKVEKSSMFNGLLLKGADLIDDIKRKLEEECPGVVSCADTMAFATNEAMSLAGLPRQPPLGGRRDSLYSLATVAEDNNLPLPNWNADQMIELFNRKGFTPEEMVILLGAHSVGAAHCDVFMERVYNYKNTFKPDPALPLPVVDELKQICSNPGTPQFRNPPVNFDETPTLLDNLFFKDMVEKSKTLLITDAHLIGDPRTAPVVKQMADDVGLFQKRFAELMIRLSAMNVLTGNDGEVRKICRSTN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi330g00038 375 PRINTS Plant peroxidase signature 164 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 PRINTS Plant peroxidase signature 104 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 PRINTS Plant peroxidase signature 145 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 PRINTS Plant peroxidase signature 183 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 PRINTS Plant peroxidase signature 231 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 PRINTS Plant peroxidase signature 80 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 PRINTS Plant peroxidase signature 309 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 PRINTS Plant peroxidase signature 349 362 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 SUPERFAMILY Heme-dependent peroxidases 71 375 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 CDD secretory_peroxidase 70 374 IPR033905 GO:0004601|GO:0042744
Sebi330g00038 375 PRINTS Haem peroxidase superfamily signature 102 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 PRINTS Haem peroxidase superfamily signature 294 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 PRINTS Haem peroxidase superfamily signature 165 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 PRINTS Haem peroxidase superfamily signature 183 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 ProSiteProfiles Plant heme peroxidase family profile. 70 375 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 FunFam Peroxidase 74 222 - -
Sebi330g00038 375 Gene3D - 74 375 - -
Sebi330g00038 375 Gene3D Peroxidase, domain 2 210 354 - -
Sebi330g00038 375 ProSitePatterns Peroxidases proximal heme-ligand signature. 232 242 IPR019793 -
Sebi330g00038 375 PANTHER - 66 375 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi330g00038 375 FunFam Peroxidase 210 354 - -
Sebi330g00038 375 Pfam Peroxidase 88 339 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi330g00038 Sebi-Chr330 555856 557354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi330g00038 69 375 Peroxidase AT3G03670 40.453 1.02e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi330g00038 K00430 - gmx:100802856 474.552