Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi330g00037 ATGGCTTCTCTTTCTCAACTTCTTTCTCTTATCCTCCCTCTGCTGGCAGCTTCATTGATACCAAGTGTGTTTTCCCTTGATGTTTCAATCAAAACAACATACTTGGAACCCTTTAAATGTTCACCAAAAATCAGGACATGCAATGCCTCACTCTACCATATAAGCAATGGTTACAAGATAAACGAAATAGCCTACTTTTACTCTGTTAATTCCTCCCAAATCAAACCCATAATGCGTGGCACCAAACAAGATTACCTCATAACAGTGCCTTGTTCTTGCAAAAACACCATTGACCTTAGCGGATATTTCTATGATATAAACTACACAGTGAAGACTAACGAAAATTTTGTGGATATTCAAAAGCTGATTTACAGTGGGCAAGCTTGGCCTGTTAAGGAAAATTTGGTCCCAGATGAGAATATAACAATACATATTCCTTTTGATGGTATGGTGAATATGAACCAAGTTATGGCTCCCAACCCCACATTCATAGATATTGATTGGGTGTTATATGTTCCCAAGGAATTAAATCCACTTTCCAATGGAAAAGAAAAGAAACATGAGTTGGTGACAATTATTGGCATCTTAGTGGGTGTGACACTGCTTTTAATTATTACCTTGATCATTCTCATTCTCACAAGAAATAAAGCCTATGAAACTTGCAAAAATGATCCAAACGCTGTCTCTAAAAGATCAATTGCCAATAGAAGTACTGTTTCCTTAAAGAACCGTGAATTTCTTACAGAATGCATGGAAGATGGAACACAATTTGACTCAGAGAGGCCAGTAATTTATACCCTTGAGGAGATTGAACATGGTACAAATAACTTTGATGAAACTCGAAGAATTGGAGTTGGTGGATATGGGAGTGTGTATTTTGGAATGTTAGGGGACAAGGAGGTTGCTGTGAAGAAGATGAGGTCTAACAAATCCAAGGAATTCTATGCAGAACTCAAGGCCTTGTGTAAGATCCATCACATTAACATTGTGGAGTTGTTGGGATATGCCAGTGGAGATGACCATCTTTATTTGGTGTATGAATATGTTCCAAGTGGATCTCTAAGTGAACATCTTCATGATCCATTGCTGAAAGGTCACCAGCCTCTTTCTTGGTGTGCTAGGCTTCAAATAGCACTGGATGCAGCAAAAGGCATTGAATACATACATGATTACACCAAAGCACGATATGTGCACCGTGATATAAAGACTAGTAATATTCTTCTTGATGAAAAGCTCAGAGCAAAGGTAGCAGATTTTGGTCTTGCAAAACTAGTAGAACGAACCAATGATGAAGAATTCATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCGCCAGAATCTGTGAAGGAGTTTCAAGTGACTGTAAAAACCGATGTATTTGCATTTGGAGTAGTTCTGTCAGAGTTGATAACAGGGAAACGTGCACTCTTTCGTGACAACCGAGAAGCCACCAGTACCAAATCACTCATTGCACTTGTTAACCAAATATTTCAAGATGATGATCCAGAGACTGCTTTAGAAGATGCTGTAGATGGGAATCTTCAACGCAGCTATCCTATGGAAGATGTGTACAAGGTGGCAGAAGTATCTCATTGGTGCTTGCGCGAAGAGCCAGTGGAGAGGCCTGAAATGAGGGAGGTGGTTGTGGCATTGTCAAAGATTATAATGTCCTCTATAGAGTGGGAAGCGTCACTAGGTGGTGACAGCCAGGTCTTCAGTGGGGTATTTGATGGAAGATGA 1746 0.3998 MASLSQLLSLILPLLAASLIPSVFSLDVSIKTTYLEPFKCSPKIRTCNASLYHISNGYKINEIAYFYSVNSSQIKPIMRGTKQDYLITVPCSCKNTIDLSGYFYDINYTVKTNENFVDIQKLIYSGQAWPVKENLVPDENITIHIPFDGMVNMNQVMAPNPTFIDIDWVLYVPKELNPLSNGKEKKHELVTIIGILVGVTLLLIITLIILILTRNKAYETCKNDPNAVSKRSIANRSTVSLKNREFLTECMEDGTQFDSERPVIYTLEEIEHGTNNFDETRRIGVGGYGSVYFGMLGDKEVAVKKMRSNKSKEFYAELKALCKIHHINIVELLGYASGDDHLYLVYEYVPSGSLSEHLHDPLLKGHQPLSWCARLQIALDAAKGIEYIHDYTKARYVHRDIKTSNILLDEKLRAKVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESVKEFQVTVKTDVFAFGVVLSELITGKRALFRDNREATSTKSLIALVNQIFQDDDPETALEDAVDGNLQRSYPMEDVYKVAEVSHWCLREEPVERPEMREVVVALSKIIMSSIEWEASLGGDSQVFSGVFDGR 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi330g00037 581 FunFam PTI1-like tyrosine-protein kinase 3 349 567 - -
Sebi330g00037 581 FunFam Kinase family protein 253 348 - -
Sebi330g00037 581 Pfam Protein kinase domain 278 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi330g00037 581 Gene3D Transferase(Phosphotransferase) domain 1 349 566 - -
Sebi330g00037 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Sebi330g00037 581 SUPERFAMILY Protein kinase-like (PK-like) 261 553 IPR011009 -
Sebi330g00037 581 Gene3D Phosphorylase Kinase; domain 1 255 348 - -
Sebi330g00037 581 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 154 577 IPR044812 GO:0019199|GO:0045087
Sebi330g00037 581 SMART serkin_6 277 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi330g00037 581 ProSitePatterns Protein kinases ATP-binding region signature. 283 305 IPR017441 GO:0005524
Sebi330g00037 581 ProSiteProfiles Protein kinase domain profile. 277 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi330g00037 Sebi-Chr330 548294 551964 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi330g00037 247 581 Receptor kinase-like Gene Family AT1G51940 51.020 4.54e-116 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sebi330g00037 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi330g00037 - - gmx:100800907 844.728