Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi32g00111 ATGGATCAATTTGATCTTGAAAACCCTCTAAAAAACTTCCATGACGTTCCTTGTGATGCTGTCTCTTCTCTCTTCCTCATTGAATCTGACCACATCCCACCACCAAATTACTTTCAGAGTCTCAAAGCCAGCGACTTTGATATCTCCGTTAGAAGAGATGTTATCTCTTTGATCTCACAGTTGTCCTGCACCTTCGATCCATTTCTTCCTTACCTAGCTATCAACTATTTGGATCGCTTCCTCGCTAACCAAGGGCAACCAAAGCCATGGACCAACAAGTTACTTGCAATTTCTTGCTTCTCTCTAGCAGCCAAGATGTTGAAAACAGAGTACTCTGCCACTGATGTTCAGGCTCTTATGAATCATGGTGATGGAAGTGTCATTTTTGAGACACAAACCATACAAAGAATGGAAGCACTTGTCTTGGGGGCTCTACAATGGCGAATGCGTTCGATCACCCCTTTCTCTTTCATTCCTTTCTTCAGCAATTTGTTCATGATCAATGACACTGCATTGAGGCAGGTTCTGAAAGATCGAGCATCTCAAATTATATTGAAGTCACAGAGAGATTTAAAGGTTTTGGAATTCAAGCCATCCATAGTTGCTGCTTCAGCCCTTCTGTATGCTTCACATGAATTGTTTCCCTTTCAATATCCATGCTTCTTAAGAGCAATATCCGATTGCTCATATGTAAATAAAGAAAGTGTGGTGCAGTGCTATAATGTGATAGAAGACACAGCTAGGGAGGAGTACGAATCTGTGTTCAATGTAAATTCAAGTTCAGACACACCGGTTAATGTGTTAGATGAACATTTTCTGAGCTTGGAAAGTGAAAAAACCAACGGAACCAACGCTGCACCCACTACTCTGATACATGAGAAGGACTACAAGAGAAGGAAAATCACCGATTATGGTAGCACAGTTCAGTTTTCACATTTTCATTAA 945 0.4085 MDQFDLENPLKNFHDVPCDAVSSLFLIESDHIPPPNYFQSLKASDFDISVRRDVISLISQLSCTFDPFLPYLAINYLDRFLANQGQPKPWTNKLLAISCFSLAAKMLKTEYSATDVQALMNHGDGSVIFETQTIQRMEALVLGALQWRMRSITPFSFIPFFSNLFMINDTALRQVLKDRASQIILKSQRDLKVLEFKPSIVAASALLYASHELFPFQYPCFLRAISDCSYVNKESVVQCYNVIEDTAREEYESVFNVNSSSDTPVNVLDEHFLSLESEKTNGTNAAPTTLIHEKDYKRRKITDYGSTVQFSHFH 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi32g00111 314 SMART cyclin_7 52 143 IPR013763 -
Sebi32g00111 314 Gene3D - 34 150 - -
Sebi32g00111 314 FunFam D6-type cyclin 34 146 - -
Sebi32g00111 314 SUPERFAMILY Cyclin-like 134 248 IPR036915 -
Sebi32g00111 314 SMART Cyclin_C_2 152 267 IPR004367 -
Sebi32g00111 314 FunFam D6-type cyclin 147 241 - -
Sebi32g00111 314 PANTHER CYCLINS 26 253 IPR039361 -
Sebi32g00111 314 CDD CYCLIN_AtCycD-like_rpt2 152 243 - -
Sebi32g00111 314 Pfam Cyclin, C-terminal domain 152 261 IPR004367 -
Sebi32g00111 314 Pfam Cyclin, N-terminal domain 26 149 IPR006671 -
Sebi32g00111 314 SUPERFAMILY Cyclin-like 13 149 IPR036915 -
Sebi32g00111 314 Gene3D - 23 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi32g00111 Sebi-Chr32 2802990 2804642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi32g00111 3 302 Core Cell Cycle Gene Families AT4G03270 43.396 4.03e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi32g00111 K18812 - gmx:100799951 533.102