Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi32g00097 ATGTCTCATCACAGCACAGTGAAGATCTTGGACCTGTGCCAAGTTGGTCCGCCACATGCCTCACTTCCCTCAACCACTTTTTCCCTCACTTTCTTTGACCTTCCATGGCTACACTGTCGCCCCGCCAAACGCATCTTCTTCTACGACTTTCCCCATCCCACACACCACTTCCTCCAAACAACACTTCCAATTCTCAAGCACTCTCTATCCCTCTCCCTCCAACACTTCTTCCCTTTCGCCGGCAATCTCATCATCCCTCCACAACCCCACCACCACGTCCCTTACATCCGCTACCTCCCCGGAGACTCTGTCTCCTTCACCGTCTCAGAGTCCACTGCAGACTTCAACCTCCTCATATCTGATTCACCCCAGGACGTTCGAAACTGGCACCCCCTTGTCCCTACATTGCCTTCACCTCGTACTGACGACGATGACACACGTGTTATCCCTCTCATGGCCATTCAGGTCACGATTCTACCATGCTATGGACTCAGCATCTGTGCCGCGTTCAGCCATGTTGCTGCTGATGGAAAATCACTTCACCATTTCATGAAGTATTGGGCCTCTGTTTGCAAGGCAAATTGGGATTTGACTCCCCTTGAAGGTTCTCTGTCTCTTCCTATCCATGATAGAGACAGAGTTAAAGACCCAAAGGGGCTTAAGCTTGTTTACTTACGGGAAAGCATGAAGTTTGAAGGCTTCGTACGAGATGTTTACACTAACAAGGTACGCGCCACTTTTGTGTTGAGTCATGAACGGGTTGAGAAAGTCAAGAAATGGATTTCTCTTAAATGTGCTAGCAGCTACGCTTCAGGGACACCGCACGTGTCTACCTTTGTGGTAACATGCTCCCTGGTTTGGGTTTGTATGGTAAAATCAGAACAGAGCAATGTTAATTGTGTTGCAAAAGGCTGTGATGAACTCTGTTACTTGGTCTTTGTAGCGGATTGTCGTGACAGTCCTGAATTTTCATTAACTTCAACGTACTTTGGGAATTGCTTGGCCTCTCTTATTCCGGCTGTGAAGAGGGGTGAGATAGTGGGAGAGAATGGGATCGTTGTGGCAGCAAATGCTATTGGAAGGAAGGTTAGAGATTTCAAGAGTGATGCTTTGGGAGGGGCTGAAACATTGATGTCAGATTTCAGAGAATTAGGAAAACCAGGTAAATCTGTATTAGTAGTTGCAGGGTCACCAAGACTGGGCGTGTATGAAACTGATTTTGGGTGGGGAAAGCCTAAGAAGTCTGAAGCAGTGCATCTTGATTCATCAGGATCAATTTCTCTTTCTGATTGTAGAGACAAAGACAGTAGAATTGAGTTTGGTTTGGCACTTGAAAGGATTCAAATGACTAATTTTGTCAACATCTTGGAACAAGAACTTAATAATATTGTGGCACGTGAATGA 1404 0.463 MSHHSTVKILDLCQVGPPHASLPSTTFSLTFFDLPWLHCRPAKRIFFYDFPHPTHHFLQTTLPILKHSLSLSLQHFFPFAGNLIIPPQPHHHVPYIRYLPGDSVSFTVSESTADFNLLISDSPQDVRNWHPLVPTLPSPRTDDDDTRVIPLMAIQVTILPCYGLSICAAFSHVAADGKSLHHFMKYWASVCKANWDLTPLEGSLSLPIHDRDRVKDPKGLKLVYLRESMKFEGFVRDVYTNKVRATFVLSHERVEKVKKWISLKCASSYASGTPHVSTFVVTCSLVWVCMVKSEQSNVNCVAKGCDELCYLVFVADCRDSPEFSLTSTYFGNCLASLIPAVKRGEIVGENGIVVAANAIGRKVRDFKSDALGGAETLMSDFRELGKPGKSVLVVAGSPRLGVYETDFGWGKPKKSEAVHLDSSGSISLSDCRDKDSRIEFGLALERIQMTNFVNILEQELNNIVARE 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi32g00097 467 Gene3D - 241 464 IPR023213 -
Sebi32g00097 467 PANTHER - 7 462 - -
Sebi32g00097 467 Pfam Transferase family 18 455 - -
Sebi32g00097 467 Gene3D - 2 240 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi32g00097 Sebi-Chr32 2379123 2380526 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi32g00097 64 456 Monolignol Biosynthesis Gene Families AT5G48930 23.188 4.71e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi32g00097 - - gmx:100797294 653.669