Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi32g00025 ATGGCGTCTGGACCTTCCGGTCGCGGTAACGGCGGCTCCAAGGGTTTTGATTTTGGTTCCGATGACATCCTTTCTTCATATGAGGACTATACCAACCAGGATTCTTCTAATGGCAGTCACATCGATCCCAGTAAGGACTTTCACATATCAAGAATGACAAAAGCATCAACATATCCTGTTACTGCCTATAGCTCACCTGAAGATTCTTTAAGCCAAGATGTGATTGCGACTGTTGAGAAGAGTATGAAAACATATGCTGACAACCTTATGCGGTTTCTTGAGGGAATCAGCTCGAGGCTGTCACAGTTGGAATTATATTGTTACAATCTCGACAAATCAATTGGAGAAATGAGATCTGATTTAAATAGTGACCATGAGGAGGCAGATTCAAAACTCAAGTCTCTTGAGAAACACCTTCAGGAAGTACACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTAGCCGAGACTCAGAAAGAATTAGCCAAGCTTCAACTTGTTCAGAAAGAATCATCTTCCTCAAGCCATCCGCAGTCTAATGAGGAAAGGTCTTCGCCTTCTGCAATGGATCAAAAAAGAACCGATAATGCATCTGACACACATAACCAGCAGTTAGCTCTTGCCCCGCCTCATCAAGTTGCCTTCCAGCAGCAGCCTGTGGCACCTCCTTCTCAAGCTCCAGCTCCAAATGTGACTCAAGCCACTCAACAACCTCATTATTACATGCTGCCCAATCCCCCAGCTATGTCCCAGCTTCCCCAGAATCAGTATCTTCCGTCTGATCCACAGTATCAAAATCCACAATCAACATCATCTCAAGCAACCCAGTCCCTGCCAGTGCAACAATTTTCCCAGTATCAGCAGCCACAGCAACAGCAATGGCCTCAACAGTTACCTCAGCAGGTAGAACCTCCGCAACCACCCTCAATGCTGTCTCAAATGAGACCCCCCACAACAAATGTTTACACTCCATACATTACAAGCCAAGCTCCAAATCCACCTCCCATTGGAACACTGCCAAATAGCATGCCATATTCAGGGATTCCACCCCCAGGATCTAACCGTGGCGATGCCATGCCATATGGATATAGTGGAACTGGTAGAACAGTTCCACAGCAACCTCCACCCCAGCAAATCAAGGGCTCTTTTCTAGCACAACCAGGTGTGTATGGAAGTAGCGGGAGCCACGCCACGCATCCTCCTGCTAGTGCATACATGGTGTATGATGGTGAGGGTGGCAGAGCACATTATCCACCCCAATCTACTACCTTTGCTCAAGCTGGATATCCTCCAACAAGTGCTTCCCTTCAGAACCCTGCACCACATAATCTTATGGCCCGGAATCCTAGCCAGCCACAATATATCCGCAGCCATCCCTACAATGAATTGATTGAGAAATTGGTGAACATGGGATTTAGGGGTGACCATGTGGCAAGCGTTATTCAGAGGATGGAAGAAAGTGGGCAACCTATAGATTTTAACTCTCTACTTGACCAGTTGAATGTACATAGTTCAGTGGGTCCTCAGAGGGGATGGTCAAGGTAA 1548 0.4658 MASGPSGRGNGGSKGFDFGSDDILSSYEDYTNQDSSNGSHIDPSKDFHISRMTKASTYPVTAYSSPEDSLSQDVIATVEKSMKTYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLNSDHEEADSKLKSLEKHLQEVHRSVQILRDKQELAETQKELAKLQLVQKESSSSSHPQSNEERSSPSAMDQKRTDNASDTHNQQLALAPPHQVAFQQQPVAPPSQAPAPNVTQATQQPHYYMLPNPPAMSQLPQNQYLPSDPQYQNPQSTSSQATQSLPVQQFSQYQQPQQQQWPQQLPQQVEPPQPPSMLSQMRPPTTNVYTPYITSQAPNPPPIGTLPNSMPYSGIPPPGSNRGDAMPYGYSGTGRTVPQQPPPQQIKGSFLAQPGVYGSSGSHATHPPASAYMVYDGEGGRAHYPPQSTTFAQAGYPPTSASLQNPAPHNLMARNPSQPQYIRSHPYNELIEKLVNMGFRGDHVASVIQRMEESGQPIDFNSLLDQLNVHSSVGPQRGWSR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi32g00025 515 Coils Coil 118 168 - -
Sebi32g00025 515 MobiDBLite consensus disorder prediction 166 186 - -
Sebi32g00025 515 Pfam UBA-like domain (DUF1421) 461 505 IPR010820 -
Sebi32g00025 515 MobiDBLite consensus disorder prediction 214 233 - -
Sebi32g00025 515 MobiDBLite consensus disorder prediction 241 317 - -
Sebi32g00025 515 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 514 - -
Sebi32g00025 515 MobiDBLite consensus disorder prediction 249 300 - -
Sebi32g00025 515 MobiDBLite consensus disorder prediction 166 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi32g00025 Sebi-Chr32 527315 530580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi32g00025 74 189 Trihelix Transcription Factor Family AT5G14540 35.345 4.82e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi32g00025 - - aip:107610486 677.937