Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi32g00022 ATGGAGCCTCTGCTCAGAGGCGAAAGCAGTGACACTGGCCGGAGGTACCGGCAGCGAGGGATATTCGGCCGCTCCGATGCTATCACCTACGGCTCCAACTACGAGAAAGCCGCCGCCCTCGTCGATCTGGCTGAAGATGGTGTTGGTATACCTGAGCAGATTCTTGATTCATCAAACTTTCAAAGTTATGCAAGATTTTATTTTATCTTCACTAAATGTGATCTCATCTGGTCTCTTAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAACCTCTATGGTGTGAGAAGTATACAACACAATCTTGCAAAGATAGAGAGTATTTCTTTTTGGGACAGTTGCCATATCTATCTGCTGCAGAATGTCTTATTTATGAGGCCTTCTGTATCTTAATTCTTGTTGCTGATATGCTGGTTTATGCTCTTTATATGTCTTCACTGGCTTTTGATTTTCTGCCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTCGTTCTGAATATTAGGGAGCTACGAGAAACTGTCATCATCTTGGTTGGAATGCTTGACACATACTTAAATATCTTGGCTTTGGGACTTCTGTTCCTTGTTTTTGCAAGTTGGGTGGCTTATGTGATTTTTGAAGATACAATACAGGGGAAAACAGTATTCACTTCCTACGGTACTACATTATATCAGATGTTTCTTTTATTTACCACAGCCAATAATCCAGATGTTTGGGTTCCTGCATACAAGTCTTCACGTTGGTATTGCCTGTTTTTCATTCTCTTTGTGCTGGTGGGAGTATACTTTGTTACAAACTTGATCCTTGCCGTTGTTTATGAGAGTTTCAAGAGTGAGCTTGTAAAACAAGTTTTTGAGACGGATCGAAAGAGAAGAGCTATGCTGGAAAAAGCTTTTAATCTCCTAGATACACATAATGTTGGATTTCTTAACAAAGATCAATGTATTAGGCTCTTTGAGGAGCTGAACAAGTACAGGACTTTGCCAAATATCTCCCGGGAAGAATTTGAGTTGATATTTGATGAGCTGGATGATAGTCATGATGTAAAGATCAACAAGGATGAATTTGCTGATATTTGTAATGCCATTGCTTTAAAATTCCAGAAGGAGGAATCTCTTTCTTACTTTGAGTATTTAGTATTCTACCATTCACCCACCTCAAAGAGATTGAAAGCCTTCGTGAAGAGCCCCATGTTTGGATACCTAGTGTCCTTCATTCTCATACTGAATCTGGTTGCTGTAATTATTGAGACAACGCTTGATATAGAAAACAATTCTGGTCAAAAGGTGTGGCAAGTGGTTGAGTTCGTTTTTGGGTGGATATACGTAATAGAAATGGCTCTAAAGGTTTATGCATATGGATTTGAGAACTATTGGCGGGATGGTCAAAATCGCTTTGATTTTATCATCACATTGATAATTGTCATTGGAGAAACTATAACTTTTGCCTCACCTGATGGTCTGCTTTTTTTCTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTGAGATTGATAAGGCTCCTAATGCATGTCAAGCGATACCGAGGCTTTGTGGCAACTTTCTTAACGCTTATACCAAGTTTGATGCCATACCTAGGGATCATATTTTGTGTCTTATGTATTTATTGCTCACTTGGTGTACAGATTTTTGGTGGAATCGTTAATGCTGGAAACCCCAAATTGGAAACAACAGACCTTGCGGATAATGACTATTTACTTTTTAATTTCAATGATTATCCAAATGGAATGGTGACACTTTTCAATTTTCTAGTCACGGGGATCTGGGAAGAAGTGATTGAGAGCTACAGGGAATTAACTGGGACTTCTTGGACCTATCTATACTTCATTAGCTTCTACTTAATCACTGTGTTGCTGCTTTTGAATTTGATTATTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGATCTTGAGTCATCAGAAACTTGTGATGGAAATGACAAGGAAGCTGAAGGAGATAAACAACGAAGGCCGCGGTCTGTTGGGATGCACGAAGTAGCCAACCTTATTCTGTGA 2058 0.3926 MEPLLRGESSDTGRRYRQRGIFGRSDAITYGSNYEKAAALVDLAEDGVGIPEQILDSSNFQSYARFYFIFTKCDLIWSLSYFALIVLNFLEKPLWCEKYTTQSCKDREYFFLGQLPYLSAAECLIYEAFCILILVADMLVYALYMSSLAFDFLPFRIAPYIRVVLFVLNIRELRETVIILVGMLDTYLNILALGLLFLVFASWVAYVIFEDTIQGKTVFTSYGTTLYQMFLLFTTANNPDVWVPAYKSSRWYCLFFILFVLVGVYFVTNLILAVVYESFKSELVKQVFETDRKRRAMLEKAFNLLDTHNVGFLNKDQCIRLFEELNKYRTLPNISREEFELIFDELDDSHDVKINKDEFADICNAIALKFQKEESLSYFEYLVFYHSPTSKRLKAFVKSPMFGYLVSFILILNLVAVIIETTLDIENNSGQKVWQVVEFVFGWIYVIEMALKVYAYGFENYWRDGQNRFDFIITLIIVIGETITFASPDGLLFFSNGEWIRYLLLARMLRLIRLLMHVKRYRGFVATFLTLIPSLMPYLGIIFCVLCIYCSLGVQIFGGIVNAGNPKLETTDLADNDYLLFNFNDYPNGMVTLFNFLVTGIWEEVIESYRELTGTSWTYLYFISFYLITVLLLLNLIIAFVLEAFFAEMDLESSETCDGNDKEAEGDKQRRPRSVGMHEVANLIL 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi32g00022 685 FunFam Two pore calcium channel protein 1 172 283 - -
Sebi32g00022 685 ProSiteProfiles EF-hand calcium-binding domain profile. 334 369 IPR002048 GO:0005509
Sebi32g00022 685 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 130 675 IPR044581 GO:0005245
Sebi32g00022 685 Pfam Ion transport protein 400 645 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sebi32g00022 685 Pfam Ion transport protein 73 281 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sebi32g00022 685 Gene3D - 280 364 - -
Sebi32g00022 685 MobiDBLite consensus disorder prediction 655 674 - -
Sebi32g00022 685 FunFam Two pore calcium channel protein 1 525 681 - -
Sebi32g00022 685 SUPERFAMILY Voltage-gated potassium channels 399 645 - -
Sebi32g00022 685 Pfam EF-hand domain pair 298 362 IPR002048 GO:0005509
Sebi32g00022 685 Gene3D - 391 524 IPR027359 -
Sebi32g00022 685 Gene3D - 525 679 - -
Sebi32g00022 685 Gene3D - 172 279 - -
Sebi32g00022 685 FunFam Two pore calcium channel protein 1 392 524 - -
Sebi32g00022 685 CDD EFh 297 362 IPR002048 GO:0005509
Sebi32g00022 685 SUPERFAMILY EF-hand 283 366 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi32g00022 2 676 Ion Channels AT4G03560 64.831 0.0 945
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi32g00022 K16900 - gmx:100806160 1127.08