Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi32g00008 ATGTCTCCTCGTACCTTTTGCTTCCTCTTAATCCTTGACACAACTCTTGTATTTCTAAGTTCAGTGTCAGCAATTGAATTTGTCTATAATAGAAACTTCAACTCTACCAACATAAAGCTCTATGGGAATGCCACCATTCAAAAATCGATTCTTACTCTTACTAACCAGACTTTCTTCTCTATAGGTCGTGCCTTTTACCCTCACAGCATACCTATGAAACCACCCAACTCTTCCACCCCTCTTCCTTTTGCAACCTCTTTTATCTTCTCCATTGCTCCTTGTAAGAACTTCCCTGTTGCTCATGGCTTTGCTTTCATTCTCTCACCTGTGATGGCCATAAATGGAGCACTCTCTGGGAATTATTTGGGACTTTTTAACCGCTCCACTTCAGGTAATTCTTCCAACCATGTCTTTGCTGTTGAGTTTGATGATTTTAGAAACGAAGAGTTCAATGAAGAGAATGATAATCATGTGGGTGTTGACTTGAATTCAATGATTTCTTTGTATTCTGAACCTGCTGGGTATTGGGGTGGTGGGAAAGATGGTAAGGAATTCGAGAAGTTGAAACTGGCTAGTGGTTTAAACTATCAAGTTTGGATAGAGTTTGAGAATTCACAACTTAATGTTACTATGGCCCCAGCAGGGAAAAAGAAGCCTCAAAGGCCTTTGATTAGTAAGCCTATTAACCTTTCTGGGGTTTTGTTGGATGAAATGTATGTGGGGTTTTCTGGATCAACAGGGAGAATGGTGGATATTTGTAGAATTCTGGCTTGGAGTTTTAGCCATTCAAATTTTTCAATTGGTGATACTTTGAGTACCAAACATTTGCCCTTGTATGTGCATCCAAAGAAATTGATTTATAGATCAACCGGTTTCATTATAGGTGTCATTTTAGGTGCACTGTTTGTCATTGGTTGCTGCACTTTGGTGTTCTTCAGTTTGTCCAGAACCAGAAGGGAAGAGCAAGAGGAAAAAATTGAGGATTGGGAATTGGAGTATTGGCCACATAGGATCAGCTACCAGGAGATTTGTGATGCAACAAGCGGATTCTCTGAAGAGAAAGTGATTGGTATTGGAACAAGTGGGAAAGTATACAAAGGAGTTTTGAAAGGAGTAGAAGTTGCAGTGAAGAGATTCAATCATGACACAGAGCATGGAATGAGAGAATTCCTGGCAGAGATTTCAAGCCTAGGTAGAATGAAACACAGAAATTTAGTGGGTTTCAGAGGTTGGAGTAAAAGAAAAGGAGGGAAGTTGATGCTTGTTTATGATTACATGGAGAATGAGAGCTTGGACAAAAGGATCTTTGAGTGTGAAGAAACCATGTTGCTGAGCTGGGAAGAAAGAAAAAGAGTTCTAGAAAATGTAGCCTGTGGAATTTTATATCTACATGAGGGTTGGGAAGTTGAGGTCTTGCATAGAGACATCAAAGCAAGTAATGTACTACTTGACAAGGATATGAATGCAAGGTTGGGGGATTTTGGGCTTGCAAGGTTGCATCACCAGGAACATGTGGCTGACACAACAAGAGTAATAGGGACTCTGGGGTACATGGCACCAGAACTAGTCAGAGTTGGAAGACCATCAACTGCAACTGATGTGTATAGTTTTGGAGTATTGGTTTTAGAAGTGGTATGTGGGAGAAGACCTATTGTAGTAGATAAGCCACCATTGGTTAACTGGGTATTTTCCCTTATGGAGAAAGGGGAATTGAGTTGTGCTATTGATGAGCGTTTGAAGGCTCAAAGTGGATATAGCAATGAGGAAGCTGAGAGACTGCTTCATTTGGGTTTGTTATGTGCAAGTGTAGAGCCTGCAGTTAGGCCAACAATGAGGCAGGTGGTGAAAGCATTGGAGGGAATAAAATGCACTGAGTGTAATGAAGAGTGCATCCATGCAGGTCTTATTGGAAAAATAAACTCAGCAGCATCATGGTCTAGGAGTTCAACAAGTTCTGCCCATACAAATTTTCCTACCTTGGATGATATTTTACCATTCAAATTTGATTCTACAGCATCTTTAAGCATCTCTTATCCTAGCCTCCAGCCAGAGTCAGATTTTGTCTCAGAAGGAAGTTTCTTCTCCATAGGTCGTGCTTTTTACCCTCAAAAAATACATACCAAACTAGCCAACTCTTCCACCCTTCTCCCTTTTGCAACCTCCTTCATTTTCTCTGTTGCCCCTATCAAAAGCTTCATTACAGGTCATGGTTTTGCCTTCATATTTACACCATCAAGAGGTGTGAATGGCACGACCTCAACTGAGTATATTGGTCTTTTCAATTTCAACGATGAAGGTAATCCTAACAACCATGTTTTCGGAGTTGAGTTTGATACAGTTAGAAATGAAGAATTCAACGATATAAATGACAATCATGTTGGTGTTGACATAAACTCACTTACTTCCTTGACTTCACATGAGGCTGGCTATTGGGGTGGGAAAGATGACAAGGAATTTAAGAAGAAGCCTCGAGTGCCTCTTATCAGTAAGAATGTTAACCTTTCTGGGGTTCTTATGGATGAAACTTATGTTGGGTTCTGTGCAGCCACAGGGATGCTAATAGACAGTGCTAAGATTCTTGCTTGGAGTTTTAGCAATTCAAATTTTTCAATTGGTGATGCTTTAATTACAGAAAATTTGCCTTCATTTGTCCTTCATAAGAGGTGGTTTTCTGGAGCACGAGCTTTAGCTGTAGGGGTGACCAGTGCTGTGTTTGTGTTAGTCTTTGGTTGTGGTTATGTAGTGTTTTGCATTCTCTGTAGGGATAAGAAAGTAGAGGAAGAAATTGAAGACTGGGAACTGGAGTACTGGCCACATAGGATTAGTTTCCATGAGATTGATGCAGCAACAAGGGGGTTTTGTGAAGAGAATGTGGTCGCTATAGGAGGGAATGGGAAGGTATATAGAGGGGTTTTGCAAGGAGTAGAAGTTGCAGTTAAGAGAATCCCTCAAGAAAGAGAAGAAGGGATGAGAGAGTTTTTGGCTGAGGTTTCAAGCCTAGGCAGAATGAAACACAGAAATTTAGTAGGGCTAAGAGGTTGGTGCAAAAAAGAAAAGGGAAACTTGATTCTAGTTTATGACTTCATGAGTAATGGAAGTTTAGACAAAAGGATCTTTGAGTGTGAAGAGGGAAAGATGCTAACTTGGGAAGAAAGGATTGAGGTTTTAAAAAATGTAGCTGCAGGGATTCTATACCTGCATGAGGGTTGGGATGTTAAGGTATTGCATAGGGACATCAAAGCAAGCAATGTTCTACTTGACAAGGACATGAATGCTAGGTTAGGGGATTTTGGATTGGCTCGTATGCATGATCATCAAGGACAAGTGGCCAGCACAACAAGAGTAATAGGGACTGTAGGATACATTGCTCCTGAAGTACTTCGAACAGGAACAGCATCAACTATGTCTGATGTGTTTGGTTTTGGAATTTTAGTGCTGGAAGTAATTTGTGGTCGAAGACCAATTGAAGAACATAAGGCAGGGCTAATTGAATGGGTGATGTCCCTAATGGTGCATGGCCAATTGCACAATGCTGTTGATAAAAGGTTGAAAGCTAAAGGGGGATACACCATTGAGGAAGCTGAGAGATTGGTACATTTGGGTTTAATGTGTTCAAATTCAGACCCTAGTATTAGACCAACGATGAGACAGGTTGTGAAAATGCTGGAGGGAGAAATGGACAACATTGAGTCTGATGAAGAAAGTATAGAGATGAGTTTGCTTGGAAAAATAAAATCAGCTGCAATGTGGTCCAAAACTGAATCTACATTTCCATACAGAGGTCACCCTACTTTTGAAGAAATTAGGATGTTCAGTTATAATTCTAAGGCATCTACAAGTGGCTCAGGTACCATTCCAGAATCAGATTCAGATATCATCCGAGAAGGCAGGTAA 3894 0.4058 MSPRTFCFLLILDTTLVFLSSVSAIEFVYNRNFNSTNIKLYGNATIQKSILTLTNQTFFSIGRAFYPHSIPMKPPNSSTPLPFATSFIFSIAPCKNFPVAHGFAFILSPVMAINGALSGNYLGLFNRSTSGNSSNHVFAVEFDDFRNEEFNEENDNHVGVDLNSMISLYSEPAGYWGGGKDGKEFEKLKLASGLNYQVWIEFENSQLNVTMAPAGKKKPQRPLISKPINLSGVLLDEMYVGFSGSTGRMVDICRILAWSFSHSNFSIGDTLSTKHLPLYVHPKKLIYRSTGFIIGVILGALFVIGCCTLVFFSLSRTRREEQEEKIEDWELEYWPHRISYQEICDATSGFSEEKVIGIGTSGKVYKGVLKGVEVAVKRFNHDTEHGMREFLAEISSLGRMKHRNLVGFRGWSKRKGGKLMLVYDYMENESLDKRIFECEETMLLSWEERKRVLENVACGILYLHEGWEVEVLHRDIKASNVLLDKDMNARLGDFGLARLHHQEHVADTTRVIGTLGYMAPELVRVGRPSTATDVYSFGVLVLEVVCGRRPIVVDKPPLVNWVFSLMEKGELSCAIDERLKAQSGYSNEEAERLLHLGLLCASVEPAVRPTMRQVVKALEGIKCTECNEECIHAGLIGKINSAASWSRSSTSSAHTNFPTLDDILPFKFDSTASLSISYPSLQPESDFVSEGSFFSIGRAFYPQKIHTKLANSSTLLPFATSFIFSVAPIKSFITGHGFAFIFTPSRGVNGTTSTEYIGLFNFNDEGNPNNHVFGVEFDTVRNEEFNDINDNHVGVDINSLTSLTSHEAGYWGGKDDKEFKKKPRVPLISKNVNLSGVLMDETYVGFCAATGMLIDSAKILAWSFSNSNFSIGDALITENLPSFVLHKRWFSGARALAVGVTSAVFVLVFGCGYVVFCILCRDKKVEEEIEDWELEYWPHRISFHEIDAATRGFCEENVVAIGGNGKVYRGVLQGVEVAVKRIPQEREEGMREFLAEVSSLGRMKHRNLVGLRGWCKKEKGNLILVYDFMSNGSLDKRIFECEEGKMLTWEERIEVLKNVAAGILYLHEGWDVKVLHRDIKASNVLLDKDMNARLGDFGLARMHDHQGQVASTTRVIGTVGYIAPEVLRTGTASTMSDVFGFGILVLEVICGRRPIEEHKAGLIEWVMSLMVHGQLHNAVDKRLKAKGGYTIEEAERLVHLGLMCSNSDPSIRPTMRQVVKMLEGEMDNIESDEESIEMSLLGKIKSAAMWSKTESTFPYRGHPTFEEIRMFSYNSKASTSGSGTIPESDSDIIREGR 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi32g00008 1297 CDD lectin_legume_LecRK_Arcelin_ConA 25 261 IPR001220 GO:0030246
Sebi32g00008 1297 SUPERFAMILY Concanavalin A-like lectins/glucanases 687 866 IPR013320 -
Sebi32g00008 1297 Pfam Legume lectin domain 690 809 IPR001220 GO:0030246
Sebi32g00008 1297 Pfam Legume lectin domain 821 868 IPR001220 GO:0030246
Sebi32g00008 1297 Pfam Legume lectin domain 25 264 IPR001220 GO:0030246
Sebi32g00008 1297 Pfam Protein kinase domain 351 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi32g00008 1297 Pfam Protein kinase domain 959 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi32g00008 1297 ProSiteProfiles Protein kinase domain profile. 953 1226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi32g00008 1297 Gene3D - 654 868 - -
Sebi32g00008 1297 MobiDBLite consensus disorder prediction 1276 1297 - -
Sebi32g00008 1297 CDD STKc_IRAK 962 1224 - -
Sebi32g00008 1297 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 311 425 - -
Sebi32g00008 1297 Gene3D - 23 274 - -
Sebi32g00008 1297 PANTHER - 42 620 - -
Sebi32g00008 1297 Gene3D Phosphorylase Kinase; domain 1 918 1028 - -
Sebi32g00008 1297 Gene3D Phosphorylase Kinase; domain 1 311 425 - -
Sebi32g00008 1297 FunFam L-type lectin-domain containing receptor kinase S.4 426 630 - -
Sebi32g00008 1297 ProSiteProfiles Protein kinase domain profile. 350 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi32g00008 1297 FunFam L-type lectin-domain containing receptor kinase S.4 23 268 - -
Sebi32g00008 1297 SUPERFAMILY Protein kinase-like (PK-like) 327 619 IPR011009 -
Sebi32g00008 1297 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 273 IPR013320 -
Sebi32g00008 1297 SUPERFAMILY Protein kinase-like (PK-like) 929 1223 IPR011009 -
Sebi32g00008 1297 CDD lectin_legume_LecRK_Arcelin_ConA 694 867 IPR001220 GO:0030246
Sebi32g00008 1297 CDD STKc_IRAK 356 621 - -
Sebi32g00008 1297 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 914 1028 - -
Sebi32g00008 1297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1074 1086 IPR008271 GO:0004672|GO:0006468
Sebi32g00008 1297 Gene3D Transferase(Phosphotransferase) domain 1 1029 1244 - -
Sebi32g00008 1297 Gene3D Transferase(Phosphotransferase) domain 1 426 634 - -
Sebi32g00008 1297 FunFam L-type lectin-domain containing receptor kinase S.4 1029 1235 - -
Sebi32g00008 1297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Sebi32g00008 1297 ProSitePatterns Protein kinases ATP-binding region signature. 356 377 IPR017441 GO:0005524
Sebi32g00008 1297 SMART serkin_6 350 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi32g00008 1297 SMART serkin_6 953 1222 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi32g00008 Sebi-Chr32 282709 287628 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi32g00008 22 572 Receptor kinase-like Gene Family AT4G04960 55.655 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi32g00008 Pkinase 9.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi32g00008 - - gmx:100804025 1135.94