Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi329g00029 ATGGAGGAAAAGGACATGCACGAGGAGAACAACGTGGCGCTACTATTCAGTTCCGACGGTGGCGCCACGCTCAACGGCCTCCTCGAAGACGAATCCACCACAACCGCTGCCACGTCAGAGGAAGGATCGATGTCGGCGCTGACGTGTCCTGCGTTGGATGGAAACTGGCTAGTGAGGAAAGCGATGAGGAAGAGTAGCAAAGAGAGGGAAGTTGAAGAGAGGTGGGTTTGTTACTCGGAAGTGGTGGAGGAGAAGAAGGAGCTTATGGAGGAAGTTACGAGTTATTGTTGTGCCACAACGGGGGATCCGTTGAGGAGAACGACGTCGTTTGCGTCGTTGTCGTTGAAGCTGGATCACGAGGGGATATTGAATGCTTGGTCTGATAAAGGCTCTCTTTATGTAGCAGAGGATGAGGCCCCACAGATTGTTCCTGATTTGTTCAATGCTCACCTTCTTCATAATGCATTTCCTCCCAATAATGTCACATGGGATGGTTGGGGGAGTGATGCTGTTGGGAACACATGGAAAGTTCCTGAAGATTGTGGAGCTAACAAGTCGAAGGTGAAAGAAGAAATGGGTTGGAAGTTGGGGCAGAGAGAGGCAAGTGTGCTGAGATACAAGGAGAAGAGGCAAAGCAGGCTCTTTGCTAAGAGGATCCGTTATGAAGTACGAAAGCTGAATGCTGAGAAGCGACCTAGGATGAAGGGACGATTTGTGAAGAGGGAATAA 729 0.4993 MEEKDMHEENNVALLFSSDGGATLNGLLEDESTTTAATSEEGSMSALTCPALDGNWLVRKAMRKSSKEREVEERWVCYSEVVEEKKELMEEVTSYCCATTGDPLRRTTSFASLSLKLDHEGILNAWSDKGSLYVAEDEAPQIVPDLFNAHLLHNAFPPNNVTWDGWGSDAVGNTWKVPEDCGANKSKVKEEMGWKLGQREASVLRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMKGRFVKRE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi329g00029 242 Pfam CCT motif 199 241 IPR010402 GO:0005515
Sebi329g00029 242 ProSiteProfiles CCT domain profile. 199 241 IPR010402 GO:0005515
Sebi329g00029 242 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 8 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi329g00029 Sebi-Chr329 1100252 1105592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi329g00029 111 241 C2C2-CO-like Transcription Factor Family AT1G73870 42.748 1.75e-21 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi329g00029 CCT 3e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi329g00029 - - gmx:100798231 324.709