Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi328g00038 ATGTCTGTTTCCCCAACTCTTGACTTGTACTGCAGTGAGACAACTAGTGATGTGGTTCAATTGGATTCCGATGATGCGGGTTTGAATGTTCCATGGGGGTACTCCGATGGTGATGAAACCTGTCTCTTGAGCTTATTAGACTCCGAACTTGATCAACTACAGGAAAAAACAAAGTCATTAGGACAGCTTCGGAAAAAAACATGGTTGATGAATGCAAGAGAAGAGGCCATAAATTGGATCCTAAAGCAAGAAAAAGCGTGGCCTCTGCAGTTGTTATCAGTTGCTTGCTTGGCACTGGCAGCGAAAATGGAAGAAATTAAAGTGCCCCTTCTATTGGACCTACAAGTGATCGAGCCTGGTTTTGTGTTTAAGCCAAAAACGGTTCAAAGGATGGAGCTTTTGGTTATGGCTAGTCTTAAGTGGCGATTGCGCACTATAACCCCTTTTGATTTTGCCTATCTTTTCATTGCTAAGCTTCCATGCTCTGCTTCTACATTGGGAGATTTGGATTATATTGTTTCTCATGTCTCAGATGTTATTATCAGAACATGTTTAGTCATGGATTTCTCAGAGTTTCCACCGTCCACAATAGCAGCAGCTGCACTGTTATTGGTATCAAATCAAAATGTTGGTGACCAGAAATCAGGTTGCATCCACAAGAATATAAGCATTGAGATGGTGCAGAAATGCTACAACCTTATGAAGCAGAAACAGATCATTCGGCGTTCAGAACAATTTTGGCCAAAGAACCTACAGTTATTGCCCTTGAGTCCTACATGTGTGCTTGATCATGCAGCTATGCAAGAAAGCAGCGATGCTCACAAGCCCTGA 831 0.4224 MSVSPTLDLYCSETTSDVVQLDSDDAGLNVPWGYSDGDETCLLSLLDSELDQLQEKTKSLGQLRKKTWLMNAREEAINWILKQEKAWPLQLLSVACLALAAKMEEIKVPLLLDLQVIEPGFVFKPKTVQRMELLVMASLKWRLRTITPFDFAYLFIAKLPCSASTLGDLDYIVSHVSDVIIRTCLVMDFSEFPPSTIAAAALLLVSNQNVGDQKSGCIHKNISIEMVQKCYNLMKQKQIIRRSEQFWPKNLQLLPLSPTCVLDHAAMQESSDAHKP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi328g00038 276 CDD CYCLIN_AtCycD-like_rpt2 146 234 - -
Sebi328g00038 276 SUPERFAMILY Cyclin-like 128 243 IPR036915 -
Sebi328g00038 276 SUPERFAMILY Cyclin-like 42 143 IPR036915 -
Sebi328g00038 276 Pfam Cyclin, N-terminal domain 88 143 IPR006671 -
Sebi328g00038 276 SMART Cyclin_C_2 146 257 IPR004367 -
Sebi328g00038 276 Gene3D - 145 230 - -
Sebi328g00038 276 PANTHER CYCLINS 59 239 IPR039361 -
Sebi328g00038 276 Pfam Cyclin, C-terminal domain 146 238 IPR004367 -
Sebi328g00038 276 Gene3D - 85 144 - -
Sebi328g00038 276 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi328g00038 Sebi-Chr328 901653 902988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi328g00038 60 239 Core Cell Cycle Gene Families AT1G70210 36.574 5.03e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi328g00038 K18810 - gmx:100799323 389.808