Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi328g00014 ATGGGGAGGGCTCCTTGCTGTGACAAAGCCACCGTCAAGAGAGGTCCATGGTCGCCTGAAGAAGACGCCAAACTCAAGACTTACATCCAACAGTACGGCACCGGTGGCAACTGGATTGCTCTTCCACACAAAATAGGTGTGGGAAAAGCTGTCGTCTTAGATGGCTTAATTATCTTCGCCCAAATCTTAAACATGGGAGTTTCTCACAAGAAGAAGACAACATCATTTGCACCCTCTATCTTAATATTGGAAGCAGTGGCAAATGCTGCTACTTCCATCATCCAAGACTATAATCTCACTAATCAAACAACATCACTAGAAGATCATCAACAGCCATACACCATGAATTCATCACAATACTCATGTGACATCATTTCCTTCCCACAAGACCCATCCACAATGAATAACATGATAACCTCCACACCAAACATATTTCAAGGGTTTGGGTTGAATTACCAGCAACAACAAATAGATGATGGTGGATCAGTGGAGCTTTTTTATGGAATGGAGGGTAATGGTAGCACGAGTACGGCTTCAACAGAAAGCAATAATAATTGGGGAGATATAAGCTCTTTGGTTTACTCACCTCTGCTTTCTGGCTATGAAGGTGGCCAGGCAATGCCTCATGCTGTTACTTTCGAGGAGGAGTGTAGGTACTTTGGGATGCAAGCGCAATAA 678 0.4366 MGRAPCCDKATVKRGPWSPEEDAKLKTYIQQYGTGGNWIALPHKIGVGKAVVLDGLIIFAQILNMGVSHKKKTTSFAPSILILEAVANAATSIIQDYNLTNQTTSLEDHQQPYTMNSSQYSCDIISFPQDPSTMNNMITSTPNIFQGFGLNYQQQQIDDGGSVELFYGMEGNGSTSTASTESNNNWGDISSLVYSPLLSGYEGGQAMPHAVTFEEECRYFGMQAQ 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi328g00014 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 35 IPR017930 -
Sebi328g00014 225 Pfam Myb-like DNA-binding domain 14 48 IPR001005 -
Sebi328g00014 225 Gene3D - 11 55 - -
Sebi328g00014 225 ProSiteProfiles Myb-like domain profile. 9 49 IPR001005 -
Sebi328g00014 225 CDD SANT 16 44 IPR001005 -
Sebi328g00014 225 PANTHER OS09G0431300 PROTEIN 1 49 - -
Sebi328g00014 225 SUPERFAMILY Homeodomain-like 9 46 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi328g00014 Sebi-Chr328 267571 268752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi328g00014 1 56 MYB Transcription Factor Family AT2G36890 74.576 9.64e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi328g00014 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi328g00014 K09422 - han:110911275 99.7525