Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi327g00053 ATGGCAAGCCTAGTAGGTGTTGGATCTAAGACTGAAGCTGGTAAGAATGTGGGAAAATCCAAAGGAGGAAAAGACAAAGGTGTCGAAAGTGAAGGTTCAAGCTTTTGGATGAAGCTCTGGATGTTGTTCGCTTGCATGGCTTGGAGGTCCAAAGCGGAACATCGCTCCTCAGGGGACACTAACAACAACAATAAACAGGATAAGGGAAAGAAACCTATAAGAGATAATGGCAAAGCTCCAGTGGTTGTTGAAGCATCCTCAAGCAACAATAACAATCAAGGAACAAGTGGATCTACTCCCCAGCTGATCATGGAACTACAATATCATTCCAATCTTAGGCAATTCACCTTTCATGAGCTCAAGTTGGCAACTGAGAATTTCAAAGCTGGAAATTTTCTTGGTGAGGGAGGCTTTGGTACTGTACATAAAGGATGGATCATTCAGAACGATTGCTCCCCATCAAAACCTGGAGTAGGGATTCCAGTTGCAGTAAAGACACTCAACAAAGAAGGAAATCAAAGTCGCAAAGAATGGGTGATTGAAGTGAGCAATCTCGGTGCCCTGGAACACCCCAACCTTGTTAAATTGGTTGGATACTGCATAGAAAGAGATAACAGGGTTTTGGTGTATGAGTTTATGCCTAGAGGAAGTTTAGAACATCATCTCTTTAGGAGTACGTAA 681 0.4273 MASLVGVGSKTEAGKNVGKSKGGKDKGVESEGSSFWMKLWMLFACMAWRSKAEHRSSGDTNNNNKQDKGKKPIRDNGKAPVVVEASSSNNNNQGTSGSTPQLIMELQYHSNLRQFTFHELKLATENFKAGNFLGEGGFGTVHKGWIIQNDCSPSKPGVGIPVAVKTLNKEGNQSRKEWVIEVSNLGALEHPNLVKLVGYCIERDNRVLVYEFMPRGSLEHHLFRST 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi327g00053 226 MobiDBLite consensus disorder prediction 54 76 - -
Sebi327g00053 226 Pfam Protein tyrosine and serine/threonine kinase 129 224 IPR001245 GO:0004672|GO:0006468
Sebi327g00053 226 ProSiteProfiles Protein kinase domain profile. 127 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi327g00053 226 SUPERFAMILY Protein kinase-like (PK-like) 97 225 IPR011009 -
Sebi327g00053 226 PANTHER OS01G0588500 PROTEIN-RELATED 71 224 - -
Sebi327g00053 226 ProSitePatterns Protein kinases ATP-binding region signature. 133 165 IPR017441 GO:0005524
Sebi327g00053 226 Gene3D Phosphorylase Kinase; domain 1 107 212 - -
Sebi327g00053 226 FunFam Serine/threonine-protein kinase BIK1 92 212 - -
Sebi327g00053 226 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi327g00053 Sebi-Chr327 990100 991094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi327g00053 43 226 Glycoside Hydrolase AT3G07070 36.170 1.30e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi327g00053 PK_Tyr_Ser-Thr 8.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi327g00053 - - tcc:18601446 200.675