Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi327g00042 ATGGAGGAGAGGACTGATATGGATAAGGTTGATGATGTGATGCCTGGTTTTCGTTTTCATCCCACAGATGAGGAGCTTGTTGATTTTTACCTCAAGAGAAAATTCAACACAAAAGAGCTGGCGGGTACTGGGGAGAAAGAGTGGTATTTCTACTGTCCAAGGGATAGAAAATACAGAAACAGTGCAAGGCCAAATAGAGTGACAAGAGCTGGGTTTTGGAAGGCCACTGGAACTGATAGGCCTATTTACTCCTCAGAAGGAAAATGCATTGGTTTGAAGAAGTCTCTTGTTTTCTATAGAGGCAGAGCTGCCAAAGGGATGAAAACTGACTGGATGATGCATGAGTTTAGGCTACCTTGTATATCAGACTCAGCTCCTCCCAAAAAATTCTCAGACAAAACCATCCCTCCAACTGATTCATGGGCAATCTGTAGGATATTCAAGAAAACCAACTCCCTGTCCATGGTACAGAAGGCTTTATCTCACCCTTGGATCTCTCAGTTACCAGGAAACATGGTATCTGATATATTCACACAGAGTGCAAACTGCAACAATCAGTTCTGTTCAGAGAACATCTCTTGCACAACAGAAGTAGTAGGATCATCAGCCATCCAATTTTGTGGTAAAAACCAGGAGCAGCTACATCAAGTCTCTGATGCCAACACCAACACCAACTTCTCAGCTTCAGATATCAATCCCCCTTATAAACCTATCAATAGCAGCAGCACAATTTCCAAGTCCTCACAAATTCCTGTTTCAGATGGAGACCTTGCTGACAACCTCATCTTCTACACACCTGAAGCAACAGGGCCCACCAACCCTGACTATATTGGTTTTGAAGAGCCAAACCAGCAGCAGTATAGTGGCTTCTCAATTAGTCTACCTCAGGATATGCAAGCAAACATTGGAACAGAGATAATAGGAGCAGAAGAACAAGGGTGGAGGAAGAACCAATTGGAAACAGTTGGGAGAACAATTGGATTTCCCTTCAGTTTGCCTCCAAATGATGCTTGGAAGGCTCCTCTGGCATGGGACTCACCCCTTTGCCCCAGTGAAATGTCCACCACTTATTCCACTAATAAATGTTACATTTAA 1095 0.4347 MEERTDMDKVDDVMPGFRFHPTDEELVDFYLKRKFNTKELAGTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRLPCISDSAPPKKFSDKTIPPTDSWAICRIFKKTNSLSMVQKALSHPWISQLPGNMVSDIFTQSANCNNQFCSENISCTTEVVGSSAIQFCGKNQEQLHQVSDANTNTNFSASDINPPYKPINSSSTISKSSQIPVSDGDLADNLIFYTPEATGPTNPDYIGFEEPNQQQYSGFSISLPQDMQANIGTEIIGAEEQGWRKNQLETVGRTIGFPFSLPPNDAWKAPLAWDSPLCPSEMSTTYSTNKCYI 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi327g00042 364 SUPERFAMILY NAC domain 13 149 IPR036093 GO:0003677|GO:0006355
Sebi327g00042 364 Gene3D NAC domain 22 154 IPR036093 GO:0003677|GO:0006355
Sebi327g00042 364 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 218 - -
Sebi327g00042 364 Pfam No apical meristem (NAM) protein 43 118 IPR003441 GO:0003677|GO:0006355
Sebi327g00042 364 ProSiteProfiles NAC domain profile. 1 149 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi327g00042 Sebi-Chr327 590290 592244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi327g00042 9 210 NAC Transcription Factor Family AT1G26870 57.709 5.98e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi327g00042 NAM 4.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi327g00042 - - gmx:100778120 500.745