Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi327g00008 ATGGTGAACTCAGTTGTTGACAATAATGCAAGAGAAACTGTGATGGTGAACTCAGTTGTTGACAATATTGCAAGAAAAACGGTGATGGTGAACTCAGTTGTTGACAATATTACAAGAGAAACTATGATAGTGAACTCAGTCGTGGACAATATTCCAAGGCATTGCAAGGGTAGGAGGAGTCGTGCTGCTAAGAAGACCACTACATTAGAACAAAAAAGGCAAAACAGTGAGGTTGGACAAACTTCAATCATTGAAATAGATCCACCTTTACATGAAGGCTCAAGTCAAGGACAAGGTTGCAGTGTGGAAAGAGTTTCATCTATACCTGAAGCAACAAGTTCAAGTAAAAAAACCATCTTGTCTTTGTTAATAGACCGTAAGCACATCCAGGAAGACGAGAAAGTCTTCTATAAGCTTGATGATACAAAAGAGGGAAGTGCAGCTGCAATGGGACTGAAAGGAAGAATTACTAGAGGTGGAATTCTCCGCAACTGTTGCCAAAAAGAAATGTCTGTGTGGGCATTTGAAAGACATGCAAACAGTGATCACAGAAAACCCTATGAACGTATTTACATCCTCCAAACACAAGAAAATCTCCAAGATTGA 606 0.396 MVNSVVDNNARETVMVNSVVDNIARKTVMVNSVVDNITRETMIVNSVVDNIPRHCKGRRSRAAKKTTTLEQKRQNSEVGQTSIIEIDPPLHEGSSQGQGCSVERVSSIPEATSSSKKTILSLLIDRKHIQEDEKVFYKLDDTKEGSAAAMGLKGRITRGGILRNCCQKEMSVWAFERHANSDHRKPYERIYILQTQENLQD 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi327g00008 201 Pfam Tify domain binding domain 154 192 IPR032308 -
Sebi327g00008 201 PANTHER PHD FINGER PROTEIN 12 59 195 IPR042163 GO:0003714|GO:0045892
Sebi327g00008 201 MobiDBLite consensus disorder prediction 94 109 - -
Sebi327g00008 201 MobiDBLite consensus disorder prediction 56 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi327g00008 Sebi-Chr327 64748 65353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi327g00008 113 192 PHD Transcription Factor Family AT4G14920 42.500 1.09e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi327g00008 - - aprc:113870228 117.087