Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi326g00029 ATGGTGTATCCATGGTTTTCCTTAGTACTGCCACCACTGTGTAGTGTCAACGTCTTCCCTTTGGTGGGTGAAGTGAGTCTTTATATTTCAAGTTTCCTAGAGGGAAGCTCAATTGATTCTTTTCGTGTGTCTGACTTTGATCAATCAGTTGGATATCGCTTAGAGGATGCTGCTGACTTGAGTGCAAACTCAGTTTTTAACTCCCTAACAGTAAGTAACCAAACAATTGCTCGTGGTCCTGTTCACATTGGTTCTTTTGACAAGTTTCCAACCTCACTTGATAAAAGCCTATTGACGAACCAAATAGAGCAACAGAGCTTGCAATTACAAAAGGTTCAATCATCAAATCTGGTCACCATATTAAGTGATAATACAGAAAATCAGGAAGAGTCTGCCATGGCTGATGCCAGTCCTAGAACTGATATTTCTACAGACGTTGACACTGATGATAAGAATCCGCGGTTTGAAAGAAGTCAGTCCCTTGCTGCTGTGGCTTCTGACTCCAGTGACAGATCAAAGGATAAAACAGATCAAAAGACTCTCCGCAGGCTTGCTCAGAATCGTGAAGCTGCAAGAAAAAGCCGGTTGAGAAAGAAAGCTTATGTTCAACAGTTGGAAAGTAGTCGTTTGAAGTTGACTCAACTGGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAATCTTTATATCAAATGCAGGTGATCAAGCACATTCCATGAGTGGAAATGGGGCCATGGCATTTGATGCAGAATATGCAAGGTGGCTAGAAGAGCAGAATCGGCAAATTAATGAGCTAAGAGCAGCTGTAAATTCTCATGCAAGTGATACAGAACTCCGCATGATTATTGATGGTGTATTGGCACATTATGATGAGATATTTAGGCTGAAGGGCATTGCAGCTAAGGCTGATGTCTTCCATTTGTTGTCTGGCATGTGGAAAACACCAGCTGAGAGGTGTTTTCTATGGCTTGGTGGTTTTCGATCATCTGAACTCCTCAAG 999 0.4264 MVYPWFSLVLPPLCSVNVFPLVGEVSLYISSFLEGSSIDSFRVSDFDQSVGYRLEDAADLSANSVFNSLTVSNQTIARGPVHIGSFDKFPTSLDKSLLTNQIEQQSLQLQKVQSSNLVTILSDNTENQEESAMADASPRTDISTDVDTDDKNPRFERSQSLAAVASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISNAGDQAHSMSGNGAMAFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIIDGVLAHYDEIFRLKGIAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi326g00029 333 MobiDBLite consensus disorder prediction 142 156 - -
Sebi326g00029 333 ProSiteProfiles DOG1 domain profile. 244 333 IPR025422 GO:0006351|GO:0043565
Sebi326g00029 333 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 221 IPR004827 GO:0003700|GO:0006355
Sebi326g00029 333 Coils Coil 255 275 - -
Sebi326g00029 333 Coils Coil 198 225 - -
Sebi326g00029 333 SUPERFAMILY Leucine zipper domain 179 222 IPR046347 GO:0003700|GO:0006355
Sebi326g00029 333 FunFam BZIP family transcription factor 178 227 - -
Sebi326g00029 333 PANTHER TRANSCRIPTION FACTOR TGA9 112 333 - -
Sebi326g00029 333 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Sebi326g00029 333 CDD bZIP_HBP1b-like 179 230 - -
Sebi326g00029 333 MobiDBLite consensus disorder prediction 125 181 - -
Sebi326g00029 333 Pfam bZIP transcription factor 179 219 IPR004827 GO:0003700|GO:0006355
Sebi326g00029 333 Pfam Seed dormancy control 261 333 IPR025422 GO:0006351|GO:0043565
Sebi326g00029 333 Gene3D - 178 230 - -
Sebi326g00029 333 SMART brlzneu 175 238 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi326g00029 Sebi-Chr326 769146 772894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi326g00029 133 333 bZIP Transcription Factor Family AT3G12250 79.104 3.37e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi326g00029 DOG1 5.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi326g00029 K14431 - gmx:100816123 463.766