Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi326g00027 ATGGCAGCTGAATTGGTAGGAGGGGCTTTTCTCTCTGCTTTGGTCCAAACCATGTTTGAGAGGATGGCCACTCGTGAGATGCTAGACTTCATTAGAGGAATAAAACATGACAATGGTCCTAACCTGCTACACAAGTTGAAGATAACATTACGGTCTGTTGATGCTCTGGTCAACCATGCTGAGGAGAAGCAGACTCAAGATTTGCACATAAGGGAATGGCTGAATGATCTCAAGGATGCCATGTTTCAAGCAGAAGACCTTTTGGATAAGATCAATGCTTCACCTTCAAGGCAGAAACTACTGGAAGGTGTGTTATGGAGTAGCAGCACAAGCAAGGTATGTTACTCTTCACTTGGTAGTTTTAGTGAAAGGATGGAGAACATTATAGATAAATTAGAAACTCTTGTGCATCAAAAGGATGTCTTGGGTTTGAGGGAAGGTGTCCATCAGATACCATCTAGAAAACTTCAAACAACTTCTTTAGCAGGAAAATCTTCTATCTATGGAAGAAATGTTGATAAGGACAATGTTATCAATCTTTTGCTTTCAGTGTCAAGTTATGGTAATGATAAGATATGTGTCTTACCCATAGTTGGTATGGGAGGAGTTGGGAAGACCACTCTTGCTCAACTTGTATACAATGATGAAAAAGTAAAGCAACATTTTGACATCAAAGCATGGGTTTGTGTTAACCAAGAATTTGATGTCTTCAAATTGACCAAGACCATTCTGGAAGCAATCCCTTTAACAAGTGATGCAATGGATCTTAACTTACAGCAGATTAAGTTGAAAGAGTTCCTTCATAACAAGAGATTTTTAATTGTTTTAGATGATGTTTGGAACGAAAGTTGTGCCATGTGGGAGATTTTAATGCGTCCATTTGAATTTGGAGCTCAAGGAAGTTGTGTCCTAGTAACAACCCGCAATGAAAATGTTGCATCAGCTATGTCAGCTATGCTTACTTTTCCAATTCAAAGTTACCATTTAAAACCACTAGCACATGATGATTGTTGGTTGCTGTTTTCTGAGCATGCATTTGATGGGGGAAGGTTCATAAAAAGTACCGAGTTGGAAGATATTGGCAGAAAGATAGTGAAAAAATGCAGGGGACTACCATTGGCAGCAAAAGCCCTTGGGGGTCTCTTGCGTTCCAAAGTAGATATAAGAGAATGGGTGAAGGTTCTGGAAAGTAAAATATGGGACTTTCCAAATGATAGGATCAATATTCTTCCAGCTCTCATGTTGAGCTATTACTATCTTCCCTCAACTCTTAAGCGTTGTTTTGCTTATTGCTCCATATTTCCTAAATACTACCAATTTAGAAGAAAGGAACTAGTGCGCTTGTGGATAGCAGAAGATCTTCTACCACATCCCAAAAGAAGTGGAAATGTGGAAGAACTTGGTACTGAATACTTTAATGATCTAGCATCAAGATCATTCTTTCTTAATTCAAGTAGGAAACGCTTTATCATGCATGATCTCATTGTTGATTTAGCTGAATTTGTCTCAGGAGAGTTCTCATTCAGATTGGAGGGAGAGAAGAATAGTCATCTGTCAAAAAGAACTCGCCATTTGTCATATTCAAAGCTTCAGTTTGATGATTTGGAGAAGATTACAGCTACATGTCAAAACCTACGGACTTTTCTTCCATCACAAGTTTTGTCATGGCCAAGATGTCTGAACTATGATGCTGTGGGCAGCTTAATATCAAATCACACAAGTTTAAGGGTCCTTTCTTTCTCACACTGTGGTAATTTGACAGCCTTACCTGATTTCTTGGGTGACTTGATACATTTAAGATATCTAGACCTCAGTTTCACTCCAATCTCCAAGTTACCTGAGTCCACAAGTTCTCTGTATAATTTGCAGACTTTGTTGTTGATAAACTGTGTTTATCTTACTGAATTGCCTCTCAAAATGGGAGAGCTAACCAACTTAAGGTGCTTGGATATTAGGGGAACAAACTTAAATGAAATGCCACCTCATATGGGTAGTTTGACAAATCTTCAAACCTTAACTGGATTTGTTCTGGGCAGTGGACAAGGGTCAGGCATTGAAGAGCTGAAGAATTTTCCTTCTCTTAAGGGAAAGATCTCTATTTCAAATCTCCAAAATGTCATTGATCCACCTAATGATATGAAGGCTAATTTGTTGGGAAATATGAAACTTAATGAGTTAATGTTGAGTTGGAGCAAAAATGCAGATGATTCAAAAAATGTTAGAAGTGTATTGCATTGGTTGGAGCCTCCTAAGACCTTGGAAAAACTTACCATTAGAAATTATGGTAGTACTTCATTCCCAGCCTGGTTAGGAGATTTTCAGTTCTCAAAGTTAGTATCTGTTGGCCTGTATGATTGTGTAAATTGTCTTTCTTTGCCAACACTGGGGCAATTGCCTTCCTTGAAAGCCCTCTCATTGGTGGGGTTCATGATTGTCACTCATATTGATGGTGTGTTTTACAACAATTTTTCTATGGAAGCAAAGCGATCTCAGAGACACAATACTGTACCATTTAGGTGCCTTGAGACTCTGCGTTTTGAGAACATGCCACAATGGAAAGAATGGCTTCCTTTTGAGGAGGAAGAGAAGGAAGATGAATATGGATCATTTCCTTGTCTTAAACAACTTTATATAAAAAATTGTCCTAAACTAAAGGGCTTGAACTTGATCCAAAAACTACCTGCTCTAGAAAAGATTGTGATTACAAATTGTCAACAGCTTGTGGTTGCAGTTCCCCCAACAATCTGTGAATTGCAATTAGAATGTTGTGAGAAGGTTTCAATCCAAAGGCCACTGCCTCAATTATTGAACCTGACAATCAGAAGCTATAATGCAGTAGAGTCACTATTTGAGGGAATAGACAACAGAAGTTCTTACATTGAAAAATTGAGCATCTCAAGTTGTCCTCTCATAAGGCAGCTCCCTAGTAATGGAATTGCAAACACATTAAAATCACTTAACATTACTAACTGTGAGAAAATTGAGTTTCCTATGAACCAATGCTTTGTATATCTTGAGATCTTATGCATCAAATGGAGCTGTAATTCCCTGAGGTCTTTCATAATGGACTTGTTTCCAAAGATGGTCCACCTTGAAATACAAGGATGTCAGACTCTAGAGTCTCTTGTAGTTTCCAGGGTGCATGTGCAACATCTTCAATCTCTGAATTCCTTAAAGATATGTGATTGTCCTAATTTTGTATCTTTCCCTGAAGGTGGACTCCCTGCTCCAAATTTGACAAATTTACATTTGGAAAAATGTATGAATTTGAAGTTCCTTCCTTGGCAAATGAAGGAGCTGCTCCCATCCCTCATGACATTGAACTTAAAAGAGTGTCCAGAACTTGAATCATTTTCAGAGGGAGGCTTGCCAGATAGTCTGAATGTACTTGAGATCTTTCATTGTGCTAAACTGTTTACCAACAGAAAAAACTGGGATTTGCAAAGACTTCCCTCTCTTCAAAGCTTTGCTATTGCAGATACATGTCAAGATGGGGAATCCTTTCCTGAAAGAGAGTTGCTGCCATCCACTCTAACATCCTTTCATATCCTTGCACTTTGGAATTTGAAGTATCTAGATGGGGACAGCCTTCAGCAATTGGCCTCTCTAGAGACTCTGGGGATTGCATGCTGCCCAAAAGTTCAGTGTATGCCGGCAAACCTTCCTTCTTCAATTTCTGCTCTTCATATCATGAAATGTCCAAGACTTGAAGAAAGATGTAAAGGAAAGAAATCTGAAGATTGGTCCAAAATTGCTCACATTCCCATGATACGAATCAACAAGAAATTGGTCCAATAG 3798 0.387 MAAELVGGAFLSALVQTMFERMATREMLDFIRGIKHDNGPNLLHKLKITLRSVDALVNHAEEKQTQDLHIREWLNDLKDAMFQAEDLLDKINASPSRQKLLEGVLWSSSTSKVCYSSLGSFSERMENIIDKLETLVHQKDVLGLREGVHQIPSRKLQTTSLAGKSSIYGRNVDKDNVINLLLSVSSYGNDKICVLPIVGMGGVGKTTLAQLVYNDEKVKQHFDIKAWVCVNQEFDVFKLTKTILEAIPLTSDAMDLNLQQIKLKEFLHNKRFLIVLDDVWNESCAMWEILMRPFEFGAQGSCVLVTTRNENVASAMSAMLTFPIQSYHLKPLAHDDCWLLFSEHAFDGGRFIKSTELEDIGRKIVKKCRGLPLAAKALGGLLRSKVDIREWVKVLESKIWDFPNDRINILPALMLSYYYLPSTLKRCFAYCSIFPKYYQFRRKELVRLWIAEDLLPHPKRSGNVEELGTEYFNDLASRSFFLNSSRKRFIMHDLIVDLAEFVSGEFSFRLEGEKNSHLSKRTRHLSYSKLQFDDLEKITATCQNLRTFLPSQVLSWPRCLNYDAVGSLISNHTSLRVLSFSHCGNLTALPDFLGDLIHLRYLDLSFTPISKLPESTSSLYNLQTLLLINCVYLTELPLKMGELTNLRCLDIRGTNLNEMPPHMGSLTNLQTLTGFVLGSGQGSGIEELKNFPSLKGKISISNLQNVIDPPNDMKANLLGNMKLNELMLSWSKNADDSKNVRSVLHWLEPPKTLEKLTIRNYGSTSFPAWLGDFQFSKLVSVGLYDCVNCLSLPTLGQLPSLKALSLVGFMIVTHIDGVFYNNFSMEAKRSQRHNTVPFRCLETLRFENMPQWKEWLPFEEEEKEDEYGSFPCLKQLYIKNCPKLKGLNLIQKLPALEKIVITNCQQLVVAVPPTICELQLECCEKVSIQRPLPQLLNLTIRSYNAVESLFEGIDNRSSYIEKLSISSCPLIRQLPSNGIANTLKSLNITNCEKIEFPMNQCFVYLEILCIKWSCNSLRSFIMDLFPKMVHLEIQGCQTLESLVVSRVHVQHLQSLNSLKICDCPNFVSFPEGGLPAPNLTNLHLEKCMNLKFLPWQMKELLPSLMTLNLKECPELESFSEGGLPDSLNVLEIFHCAKLFTNRKNWDLQRLPSLQSFAIADTCQDGESFPERELLPSTLTSFHILALWNLKYLDGDSLQQLASLETLGIACCPKVQCMPANLPSSISALHIMKCPRLEERCKGKKSEDWSKIAHIPMIRINKKLVQ 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi326g00027 1265 ProSiteProfiles Leucine-rich repeat profile. 598 619 IPR001611 GO:0005515
Sebi326g00027 1265 SMART LRR_typ_2 643 666 IPR003591 -
Sebi326g00027 1265 SMART LRR_typ_2 596 619 IPR003591 -
Sebi326g00027 1265 FunFam Probable disease resistance protein At1g61300 150 319 - -
Sebi326g00027 1265 Pfam Rx N-terminal domain 10 108 IPR041118 -
Sebi326g00027 1265 Gene3D - 13 155 - -
Sebi326g00027 1265 SUPERFAMILY L domain-like 916 1252 - -
Sebi326g00027 1265 PRINTS Disease resistance protein signature 266 280 - -
Sebi326g00027 1265 PRINTS Disease resistance protein signature 368 382 - -
Sebi326g00027 1265 PRINTS Disease resistance protein signature 570 586 - -
Sebi326g00027 1265 PRINTS Disease resistance protein signature 194 209 - -
Sebi326g00027 1265 Gene3D - 156 320 IPR027417 -
Sebi326g00027 1265 Gene3D Ribonuclease Inhibitor 509 911 IPR032675 -
Sebi326g00027 1265 Gene3D Ribonuclease Inhibitor 1047 1261 IPR032675 -
Sebi326g00027 1265 Gene3D Ribonuclease Inhibitor 912 1046 IPR032675 -
Sebi326g00027 1265 Gene3D - 416 501 IPR036388 -
Sebi326g00027 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 431 IPR027417 -
Sebi326g00027 1265 Pfam NB-ARC domain 174 396 IPR002182 GO:0043531
Sebi326g00027 1265 PANTHER DISEASE RESISTANCE PROTEIN RP 43 985 IPR044974 GO:0006952
Sebi326g00027 1265 Coils Coil 74 94 - -
Sebi326g00027 1265 Gene3D - 332 415 IPR042197 -
Sebi326g00027 1265 SUPERFAMILY L domain-like 491 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi326g00027 Sebi-Chr326 753930 757727 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi326g00027 197 817 WRKY Transcription Factor Family AT5G45050 25.187 2.34e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi326g00027 - - lja:Lj0g3v0087809.1 2048.86