Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi326g00018 ATGGAGCTTGATTTGAATCAGGAGCCTTTGGACCCAACCCGTAGTTCAGTAATTGAACTTGATTCTATATTGAATGAACTAGAATCTGCCCAGGCACATATACAGGACCGTATTAGACACCTTGAAGCAGTAACTTCCAGAGCTAGGCAGCGTCACAGGTGGCCACCGGTTCACTCTCCGATTCAGATAACCAACTTTACTGGAGAAACCACGGCAAATGATGCTCAAGGTGAAGAAAGGGAGCACCAGGAAGATGGGGAAGGGATAGTTGAAAGTGGGAAAGAGGGCAAAAGGAAAGGTGGTGCCTGTTTAATAGCTAGAGCTTTAGGGATGAAAGAAACATATGCTACTATGCCAGGGTTGTCATATACTTATTCAAATGCAAAGGAATGCCCTGTTTGTCATGGAGAGGTAACTGAAAAGGGCATTATTCCAATTTATGGCAATGCAAGGGCAAGTGATGATTGTCAGTTGGATTTGAAAGAAACTGGTTTGAGTGTTCCTCCTCGACCTCAGGCATCCAGAATTGAGAGTGTTAGGCAGCGGCTAATAACCCAAGGAGCATCTTCTTCTGTAGTTGAAAACATTCGGCGGTTTAGTAACCTTATTGGTGGACTAGGAGAGCGAGTTCAATCAGAAAGCTCCAATGCTGCAACTGTTAGAAATAATAGTTTTCTCATTCATTCTCATCCACAGTCAGACAACCATCAACATACTGGTTCTCCTCCACTTTCAAGGTTTTTAGAGCAAGGAGCTGCTTCATTTTCATCCCTTTCATCAGCATTAAATTCTGCAATGGATTCTGCAGAGAGATTAGTTCAGGACCTTGAATCATATATACATGACCGCCGCATAGGAGGAAGCAGGCAGTTAATTCCCCATGATGTTATTAGAAATTCAACTTTTAGTGTTGCTGGGACAAGCTGGTCAGCGAGTCTTACTACAGATATTGCTGCAACCAATTCTGCAGCTGCAGCTTCTTTGTCTCCGATAAGTAGGAATGTTAACACAGTTGCTGTTACAGGCTCAGAAGCCCAGACAACAGATAGTAATGTACAGATTAGTCCAATAGACCCTTCTTCATCTTACAGTAGAAGAAGAACTAATATTTCAAGACAAGATTCAAATGGGCGAAGAAGAAGATTGAGATGA 1152 0.4262 MELDLNQEPLDPTRSSVIELDSILNELESAQAHIQDRIRHLEAVTSRARQRHRWPPVHSPIQITNFTGETTANDAQGEEREHQEDGEGIVESGKEGKRKGGACLIARALGMKETYATMPGLSYTYSNAKECPVCHGEVTEKGIIPIYGNARASDDCQLDLKETGLSVPPRPQASRIESVRQRLITQGASSSVVENIRRFSNLIGGLGERVQSESSNAATVRNNSFLIHSHPQSDNHQHTGSPPLSRFLEQGAASFSSLSSALNSAMDSAERLVQDLESYIHDRRIGGSRQLIPHDVIRNSTFSVAGTSWSASLTTDIAATNSAAAASLSPISRNVNTVAVTGSEAQTTDSNVQISPIDPSSSYSRRRTNISRQDSNGRRRRLR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi326g00018 383 MobiDBLite consensus disorder prediction 74 95 - -
Sebi326g00018 383 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 124 249 IPR045103 GO:0005783|GO:0006511|GO:0061630
Sebi326g00018 383 Coils Coil 24 44 - -
Sebi326g00018 383 MobiDBLite consensus disorder prediction 344 383 - -
Sebi326g00018 383 MobiDBLite consensus disorder prediction 344 370 - -
Sebi326g00018 383 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi326g00018 Sebi-Chr326 545099 546355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi326g00018 86 201 C3H Transcription Factor Family AT3G58030 35.338 7.56e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi326g00018 - - cam:101488454 385.571