Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi326g00003 ATGTCGCAAAACAACTCTTGGAATAAAAGAAAAGCCTGCAGCCATATCGGCTATGAGGATTTTACCGAGGAAGAATATGAAGTATGTGAAGCGCTTCTTTCTTTGAAAGGAGAGAGTCAAGCTCAAGAGGAGCATGAGGACTTCCCTGCAAAAGAATATAAAGTAAGTGAAGCTCTTCTCTCTTTAGAAACAAGCCAAGAGAAGAAGAAGAAGCATAAATTGAATGAAGCTGATCATGATGCCATAAAGGGTTGCAAGAGAATCCTTATAACCAACATTCATGAAGAAGTACAGAATCTTGATGTCATGAACGATGACAATTTGCCACCAGTTCTTGGGCTTAGGAACTATATTTTTGGGTGCGGTATGCCTTTTGAGAAGCAACTGACAAAAAGCGATTTGAGGGTAGATCAAAATAGATTGTTGCTGAACAAGAATCATGTGGAAACATCTTTCTTGCCCTTGTTGAGAGAAGGTGAAAGCATTAAGGAAGGGATAGCAGTCATTGCCTATAATATGGATGGCAATGTGTTTACCATGACATTCAAGATTTGGGCAGATAAGTACTATGTGCTCATGGGAGGGTGGAAAGCTTTCTTCCAAGCACACACATTGCAAATTCAAGATTATGTCAAAGTGTGA 642 0.3956 MSQNNSWNKRKACSHIGYEDFTEEEYEVCEALLSLKGESQAQEEHEDFPAKEYKVSEALLSLETSQEKKKKHKLNEADHDAIKGCKRILITNIHEEVQNLDVMNDDNLPPVLGLRNYIFGCGMPFEKQLTKSDLRVDQNRLLLNKNHVETSFLPLLREGESIKEGIAVIAYNMDGNVFTMTFKIWADKYYVLMGGWKAFFQAHTLQIQDYVKV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi326g00003 213 CDD B3_DNA 125 211 IPR003340 GO:0003677
Sebi326g00003 213 Gene3D - 121 213 IPR015300 -
Sebi326g00003 213 Pfam B3 DNA binding domain 125 211 IPR003340 GO:0003677
Sebi326g00003 213 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 34 212 IPR005508 GO:0003677
Sebi326g00003 213 SUPERFAMILY DNA-binding pseudobarrel domain 125 211 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi326g00003 Sebi-Chr326 150826 151467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi326g00003 55 213 B3 DNA Binding Superfamily AT4G03170 31.953 4.96e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi326g00003 - - tpra:123915381 138.272