Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi325g00014 ATGGCGTCAAAGCCTGTTAAGATGCCAGATTTACATGAGAGGAACAACAATTTATCAGAAGAACCTCATAAGACACACCACCACAGTGCTCATAGTTGTGCAAATTCAGGAAATAATTCACCAACTCATCACACAATGGGGAATCAAGCAGAAAAGGATGCCTGCACAACTGAGTATTCAACAAGTGGAGCTGGACATATGGACCATTCAACAAATGGAGCAGGACATATGGACCAGGTGTCTAAAACCGATGCAAAGTTGGCAAGTAACTCTAAACCTCAGAAAATAACACCATCAAGCAAGAACATTTCTGATTTCAGTAATCAACACCAAAGTCCAAGGACAAAGATGCCTTCAAATCCTGATCCTGCAACTCACTCACCACCAGGACTACCAACAGGAACTACAAAGGGAATGTCTACCCATACAAAGACCACCAATCAATGCACAGGAAGTGGCACTAGCTCTCGCAGTGACAGTTTAGAGAGCACCAGTGCACCCATTAGGCCACATACTGGTGGTGATGTGAGGTGGGATGCAATTAACATGGTTTCCAAGAGTGGCCCTTTCAATCTCAGCCATTTCAGGCTTCTCAAACGCATTGGTTATGGAGACATTGGAAGTGTGTATCTTGTGGAACTAAGAGGATCTAATGCCCACTTTGCCATGAAAGTAATGGACAAGGCAGCTCTTATAAGCAGAAATAAGCTTCTGCGAGCACAAACAGAAAGGGAAATTCTTGGACTTCTTGATCACCCCTTCTTGCCAACTTTATATTCTTACTTTGAAACTGATAAGTTTTACTGTTTGGTCATGGAGTTCTGTAGTGGGGGTGATCTTCATTCTCTTCGACAAAAGCAACCAAACAAGTGTTTCACTGAAGAAGCTGCAAGGTTTTATGCTTCAGAGGTTTTGTTGGCTCTTGAGTACCTGCACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTCTAGTCAGAGATGAAGGGCATATCATGCTCTCAGATTTTGATTTATCACTTCGCTGCTCTGTCAGTCCTACATTAGTCAAGTCTTCACCTACCAATGCAGGCAATGGTGGTGGTGGTGACTCTGGGGGTATGTTGGGTGATGACCAAGCAGTGCAAGGCAATGCTCAACCATCAGGCTTTTTCCCTCGCATTTTGCCTTCAAAGAAGAACAGAAAGGCAAAATCAGATTTTGGCCTATTGGTTGGTGGTGGAAATCGGCTTCCTGAACTGATGGCAGAACCCACCAATGTGAGGTCAATGTCATTTGTAGGGACACATGAATATCTTGCTCCTGAGATTATCAAAGGAGAGGGACATGGCAGTGCAGTAGATTGGTGGACCTTTGGGATCTTCTTGTATGAGCTATTGCATGGAACAACACCTTTTAAAGGTGCAGGATATAAAGCCACACTTTTTAATGTTGTTGGGCAGCCATTGAGGTTCCCAGAAACTCCCCAGATCAGTTCAACAGCTCGTGATCTTATAAAAGGATTGTTGGTGAAAGAACCTCAGAAGAGAATTGCATATAAAAGAGGAGCTACAGAAATAAAACAACACCCATTTTTTGAGGGAGTGAATTGGGCTCTAGTTAGAAGTGCCATGCCTCCCCATGTACCAGAACCCATAGACTTTTCCAAGTATGCTAGCAAAGACACAGCACCCCCACCTGAGAAGAAGATGGCAGAGAATAATATTGCTCCTGATAAAAAAGCAACAGTACTACAGATTCTTATGTAG 1755 0.433 MASKPVKMPDLHERNNNLSEEPHKTHHHSAHSCANSGNNSPTHHTMGNQAEKDACTTEYSTSGAGHMDHSTNGAGHMDQVSKTDAKLASNSKPQKITPSSKNISDFSNQHQSPRTKMPSNPDPATHSPPGLPTGTTKGMSTHTKTTNQCTGSGTSSRSDSLESTSAPIRPHTGGDVRWDAINMVSKSGPFNLSHFRLLKRIGYGDIGSVYLVELRGSNAHFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPTLVKSSPTNAGNGGGGDSGGMLGDDQAVQGNAQPSGFFPRILPSKKNRKAKSDFGLLVGGGNRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGYKATLFNVVGQPLRFPETPQISSTARDLIKGLLVKEPQKRIAYKRGATEIKQHPFFEGVNWALVRSAMPPHVPEPIDFSKYASKDTAPPPEKKMAENNIAPDKKATVLQILM 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi325g00014 584 CDD STKc_phototropin_like 193 549 - -
Sebi325g00014 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Sebi325g00014 584 Gene3D Transferase(Phosphotransferase) domain 1 422 546 - -
Sebi325g00014 584 PANTHER FLIPPASE KINASE 1-RELATED 24 553 - -
Sebi325g00014 584 MobiDBLite consensus disorder prediction 1 171 - -
Sebi325g00014 584 Gene3D Phosphorylase Kinase; domain 1 193 278 - -
Sebi325g00014 584 FunFam Serine/threonine-protein kinase AGC1-5 193 278 - -
Sebi325g00014 584 MobiDBLite consensus disorder prediction 548 568 - -
Sebi325g00014 584 MobiDBLite consensus disorder prediction 129 167 - -
Sebi325g00014 584 ProSiteProfiles Protein kinase domain profile. 195 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi325g00014 584 MobiDBLite consensus disorder prediction 31 121 - -
Sebi325g00014 584 Pfam Protein kinase domain 421 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi325g00014 584 Pfam Protein kinase domain 196 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi325g00014 584 Gene3D Transferase(Phosphotransferase) domain 1 279 348 - -
Sebi325g00014 584 MobiDBLite consensus disorder prediction 7 28 - -
Sebi325g00014 584 FunFam Serine/threonine-protein kinase AGC1-7 421 546 - -
Sebi325g00014 584 SMART serkin_6 195 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi325g00014 584 SUPERFAMILY Protein kinase-like (PK-like) 184 553 IPR011009 -
Sebi325g00014 584 FunFam serine/threonine-protein kinase D6PK-like 279 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi325g00014 Sebi-Chr325 230526 232790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi325g00014 161 557 AGC Kinase Gene Family AT1G79250 80.348 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi325g00014 Pkinase 3.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi325g00014 - - gmx:100784301 838.95