Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi325g00012 ATGACTAAGATAGAAGCTGCAGTAGTTCCTGGATATCCCACCTCTTCTTTCTGCATGGAGATGGTTGTCATGCAGGATCATGATGGATGCAAAAAGAGTCCTATAACTGCCAAGGGTTTTGATCACGAGAGGAAGAAAGTGGTTCCTTGGACAAAAGAGGAGCATGAACGCTTTCTGATGGGACTTCAGAACTATGGCAAAGAGCATTGGAAAAATATCGCTCGCTATTCTGTAATCACAAAGACGCCTACCCAAGTGGTAAGCCATGCTCAAAAGTACTTCCTAAGGCAAAAGCTTTCTGGAGGGAAAGATAATAAAAGGAGGTCTAGTATCCATTATATCACCACTGATAATCTTACCGAACCTACAACTAATTCAGGTCAAGACAAGCCTATTTTGTTCAATGAGTCTCTCATGCCAATTGTGCAACCAGAAGGGATTAATCACCTCAATGAAGAGCCACTCCTGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGTGA 504 0.4206 MTKIEAAVVPGYPTSSFCMEMVVMQDHDGCKKSPITAKGFDHERKKVVPWTKEEHERFLMGLQNYGKEHWKNIARYSVITKTPTQVVSHAQKYFLRQKLSGGKDNKRRSSIHYITTDNLTEPTTNSGQDKPILFNESLMPIVQPEGINHLNEEPLLEVFNPNYESLM 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi325g00012 167 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 12 125 IPR043363 -
Sebi325g00012 167 ProSiteProfiles SANT domain profile. 50 98 IPR017884 -
Sebi325g00012 167 Pfam Myb-like DNA-binding domain 49 94 IPR001005 -
Sebi325g00012 167 SUPERFAMILY Homeodomain-like 44 98 IPR009057 -
Sebi325g00012 167 FunFam transcription factor MYB1R1 48 99 - -
Sebi325g00012 167 Gene3D - 48 99 - -
Sebi325g00012 167 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 98 IPR017930 -
Sebi325g00012 167 NCBIfam myb-like DNA-binding domain, SHAQKYF class 45 97 IPR006447 GO:0003677
Sebi325g00012 167 CDD SANT 49 94 IPR001005 -
Sebi325g00012 167 ProSiteProfiles Myb-like domain profile. 42 94 IPR001005 -
Sebi325g00012 167 SMART sant 46 96 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi325g00012 Sebi-Chr325 142286 143038 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi325g00012 Myb_DNA-binding 1.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi325g00012 - - gmx:100783469 181.8